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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G493500.1
TraesCS2B01G521500.1
TraesCS2B01G613300.1
TraesCS2D01G493400.1
TraesCS3A01G226600.1
TraesCS3B01G257900.2
TraesCS3D01G224600.1
TraesCS4B01G344800.1
TraesCS4B01G344900.1
TraesCS4D01G339800.1
TraesCS5A01G475600.1
TraesCS5A01G513700.1
TraesCS5B01G488900.1
TraesCS5D01G489000.1
TraesCS6A01G331400.1
TraesCS6B01G362100.1
TraesCS6D01G310700.1
TraesCS7B01G038200.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G13930.1 TraesCS2A01G493500.1 AT3G51240.1 10536025
AT5G13930.1 TraesCS2B01G521500.1 AT3G51240.1 10536025
AT5G13930.1 TraesCS2B01G613300.1 AT3G51240.1 10536025
AT5G13930.1 TraesCS2D01G493400.1 AT3G51240.1 10536025
AT5G13930.1 TraesCS5A01G475600.1 AT3G55120.1 10536025
AT5G13930.1 TraesCS5B01G488900.1 AT3G55120.1 10536025
AT5G13930.1 TraesCS5D01G489000.1 AT3G55120.1 10536025
AT5G13930.1 TraesCS7B01G038200.1 AT3G55120.1 10536025
AT5G13930.1 TraesCS4B01G344800.1 AT5G08640.1 18467451
AT5G13930.1 TraesCS4B01G344900.1 AT5G08640.1 18467451
AT5G13930.1 TraesCS4D01G339800.1 AT5G08640.1 18467451
AT5G13930.1 TraesCS5A01G513700.1 AT5G08640.1 18467451
AT5G13930.1 TraesCS6A01G331400.1 AT5G08640.1 18467451
AT5G13930.1 TraesCS6B01G362100.1 AT5G08640.1 18467451
AT5G13930.1 TraesCS6D01G310700.1 AT5G08640.1 18467451
AT5G13930.1 TraesCS4B01G344800.1 AT5G08640.1 21669202
AT5G13930.1 TraesCS4B01G344900.1 AT5G08640.1 21669202
AT5G13930.1 TraesCS4D01G339800.1 AT5G08640.1 21669202
AT5G13930.1 TraesCS5A01G513700.1 AT5G08640.1 21669202
AT5G13930.1 TraesCS6A01G331400.1 AT5G08640.1 21669202
AT5G13930.1 TraesCS6B01G362100.1 AT5G08640.1 21669202
AT5G13930.1 TraesCS6D01G310700.1 AT5G08640.1 21669202
AT5G13930.1 TraesCS3A01G226600.1 AT5G42800.1 10536025
AT5G13930.1 TraesCS3B01G257900.2 AT5G42800.1 10536025
AT5G13930.1 TraesCS3D01G224600.1 AT5G42800.1 10536025
AT5G13930.1 TraesCS3A01G226600.1 AT5G42800.1 21669202
AT5G13930.1 TraesCS3B01G257900.2 AT5G42800.1 21669202
AT5G13930.1 TraesCS3D01G224600.1 AT5G42800.1 21669202
AT5G13930.1 TraesCS4B01G344800.1 AT5G63590.1 18467451
AT5G13930.1 TraesCS4B01G344900.1 AT5G63590.1 18467451
AT5G13930.1 TraesCS4D01G339800.1 AT5G63590.1 18467451
AT5G13930.1 TraesCS5A01G513700.1 AT5G63590.1 18467451
AT5G13930.1 TraesCS6A01G331400.1 AT5G63590.1 18467451
AT5G13930.1 TraesCS6B01G362100.1 AT5G63590.1 18467451
AT5G13930.1 TraesCS6D01G310700.1 AT5G63590.1 18467451
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1A01G032300.1 Wheat cytosol 97.97 97.24
TraesCS1B01G040500.1 Wheat cytosol 97.47 96.49
TraesCS1D01G033800.1 Wheat cytosol 96.96 96.23
TraesCS1D01G033600.1 Wheat cytosol 96.96 95.99
HORVU1Hr1G004830.1 Barley cytosol 94.68 94.21
TraesCS2A01G025700.1 Wheat cytosol, golgi 80.0 80.2
TraesCS2A01G035300.1 Wheat cytosol 79.75 79.95
TraesCS2A01G025600.1 Wheat cytosol 79.75 79.95
TraesCS2A01G025500.1 Wheat cytosol 79.49 79.7
TraesCS2A01G527700.2 Wheat cytosol 80.25 79.65
GSMUA_Achr6P16370_001 Banana cytosol, mitochondrion, plastid 61.77 77.96
GSMUA_Achr6P10910_001 Banana cytosol, mitochondrion 64.3 77.44
GSMUA_Achr10P... Banana cytosol 63.29 77.16
AT5G13930.1 Thale cress cytosol 76.46 76.46
CDX78547 Canola cytosol 76.2 76.4
VIT_14s0068g00930.t01 Wine grape cytosol 75.95 76.34
CDX69618 Canola cytosol 76.2 76.2
Os07t0214900-00 Rice cytosol 77.72 76.18
KRH42776 Soybean cytosol 49.11 76.08
CDX70528 Canola cytosol 76.2 76.01
CDY09836 Canola cytosol 75.95 75.95
Solyc09g091510.2.1 Tomato cytosol, extracellular 74.68 75.84
Solyc05g053550.2.1 Tomato cytosol, mitochondrion 74.68 75.84
Bra008792.1-P Field mustard cytosol 75.7 75.7
PGSC0003DMT400076178 Potato cytosol 74.43 75.58
PGSC0003DMT400049165 Potato cytosol, mitochondrion 74.43 75.58
VIT_14s0068g00920.t01 Wine grape cytosol 75.19 75.57
CDX91090 Canola cytosol 75.7 75.51
Bra006224.1-P Field mustard cytosol 75.44 75.25
EES14634 Sorghum cytosol 75.7 75.13
KRH42758 Soybean cytosol 73.67 75.0
KRH42759 Soybean cytosol 73.67 75.0
KRH42783 Soybean cytosol 73.67 75.0
KRH58872 Soybean cytosol 73.67 75.0
KRH42775 Soybean cytosol 73.67 75.0
KRH37579 Soybean cytosol 73.67 75.0
VIT_05s0136g00260.t01 Wine grape cytosol 73.67 74.81
KRH42778 Soybean cytosol 73.42 74.74
KRH42757 Soybean cytosol 73.42 74.74
KRH42780 Soybean cytosol 73.42 74.74
KRH75544 Soybean cytosol 73.42 74.74
Bra023441.1-P Field mustard cytosol 74.43 74.62
KRH42760 Soybean cytosol 72.91 74.23
KRH71115 Soybean cytosol 72.91 74.23
KRG94730 Soybean cytosol 72.66 73.4
Bra036307.1-P Field mustard cytosol 72.91 73.28
CDY51056 Canola cytosol 72.66 72.84
CDY05664 Canola cytosol 72.66 72.84
Bra020688.1-P Field mustard cytosol 72.15 72.33
KRH27737 Soybean cytosol 71.14 72.24
KRH77699 Soybean endoplasmic reticulum 70.89 71.98
PGSC0003DMT400076179 Potato cytosol 68.86 71.77
CDY07114 Canola cytosol 71.9 69.27
GSMUA_Achr10P... Banana mitochondrion 59.49 68.51
CDY05666 Canola mitochondrion 64.56 61.0
TraesCS6A01G215600.1 Wheat mitochondrion 50.63 50.25
TraesCS5A01G379500.1 Wheat cytosol, mitochondrion 48.86 49.61
TraesCS5A01G379400.1 Wheat mitochondrion 48.1 49.61
TraesCS4A01G292500.1 Wheat cytosol 49.87 49.5
TraesCS2A01G021700.1 Wheat cytosol 48.61 48.0
TraesCS6A01G298400.1 Wheat cytosol 48.35 47.63
TraesCS5A01G526900.1 Wheat cytosol, mitochondrion 46.58 46.12
TraesCS5A01G379600.1 Wheat cytosol 40.25 46.09
TraesCS4A01G436200.1 Wheat cytosol, plastid 46.08 46.08
TraesCS4A01G436400.1 Wheat cytosol, plastid 45.82 45.82
TraesCS4A01G438100.1 Wheat cytosol 45.06 45.06
TraesCS4A01G438200.1 Wheat cytosol 44.81 44.81
TraesCS4A01G437600.1 Wheat cytosol 45.06 44.72
TraesCS6A01G015500.1 Wheat cytosol, plastid 46.08 44.61
TraesCS6A01G015300.1 Wheat cytosol 45.32 44.42
TraesCS2A01G014800.1 Wheat cytosol 44.05 44.16
TraesCS7A01G093900.1 Wheat mitochondrion 43.8 43.91
TraesCS4A01G392800.1 Wheat cytosol, mitochondrion 36.96 42.57
TraesCS4A01G437900.1 Wheat unclear 45.57 41.19
TraesCS1A01G160300.1 Wheat cytosol 37.72 38.21
TraesCS5A01G002900.1 Wheat cytosol 40.51 37.91
Protein Annotations
KEGG:00941+2.3.1.74Gene3D:3.40.47.10MapMan:9.2.2.1.1.1InterPro:Chalcone/stilbene_synth_CInterPro:Chalcone/stilbene_synthase_ASInterPro:Chalcone/stilbene_synthase_N
GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0016740
GO:GO:0016746GO:GO:0016747InterPro:IPR016039PFAM:PF00195PFAM:PF02797PIRSF:PIRSF000451
ScanProsite:PS00441PANTHER:PTHR11877PANTHER:PTHR11877:SF44InterPro:Polyketide_synthase_type-IIISUPFAM:SSF53901InterPro:Thiolase-like
EnsemblPlantsGene:TraesCS1A01G032100EnsemblPlants:TraesCS1A01G032100.1TIGR:cd00831SEG:seg::
Description
No Description!
Coordinates
chr1A:-:14790721..14791908
Molecular Weight (calculated)
42984.0 Da
IEP (calculated)
6.323
GRAVY (calculated)
-0.042
Length
395 amino acids
Sequence
(BLAST)
001: MAAVKLEEVR RAQRAEGLAT VLAIGTAVPA NCVYQATYPD YYFRVTKSEH LPDLKEKFER MCEKSTIRKR HMHLTEEILK KNPSICSHME PSLDTRHDIV
101: VVEVPKLGKE AAERAIKEWG QPLSKITHVV FCTTSGVDMP GADYQLARLL GLSPTVKRLM MYQQGCFGGA TVLRMAKDIA ENNRGARVLV VCSEITAMAF
201: RGPSKSHLDS LVGHALFGDG AAAAIIGADP DEPFEKSLFQ LVSASQTILP GSEGAINGHL TEAGLTIHLL KDVPGLISEN IEQALEDAFK PLGIHDWNSI
301: FWIAHPGGPA ILDMVEEKVG LDKERMRASR EVLSEYGNMS SACVLFVLDV MRKTSSQDGH ATTGEGKEWG VLFGFGPGLT VETIVLCSVP ITATA
Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)
001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
Arabidopsis Description
PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.