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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 6
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
BaCelLo:cytosol
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG92978
KRH05848
KRH05851
KRH08080
KRH15169
KRH16579
KRH18787
KRH53203
KRH69784
KRH69787
KRH71611

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G13930.1 KRH08080 AT3G51240.1 10536025
AT5G13930.1 KRH69784 AT3G51240.1 10536025
AT5G13930.1 KRH69787 AT3G51240.1 10536025
AT5G13930.1 KRG92978 AT3G55120.1 10536025
AT5G13930.1 KRH16579 AT5G08640.1 18467451
AT5G13930.1 KRH18787 AT5G08640.1 18467451
AT5G13930.1 KRH53203 AT5G08640.1 18467451
AT5G13930.1 KRH16579 AT5G08640.1 21669202
AT5G13930.1 KRH18787 AT5G08640.1 21669202
AT5G13930.1 KRH53203 AT5G08640.1 21669202
AT5G13930.1 KRH05848 AT5G42800.1 10536025
AT5G13930.1 KRH05851 AT5G42800.1 10536025
AT5G13930.1 KRH15169 AT5G42800.1 10536025
AT5G13930.1 KRH71611 AT5G42800.1 10536025
AT5G13930.1 KRH05848 AT5G42800.1 21669202
AT5G13930.1 KRH05851 AT5G42800.1 21669202
AT5G13930.1 KRH15169 AT5G42800.1 21669202
AT5G13930.1 KRH71611 AT5G42800.1 21669202
AT5G13930.1 KRH16579 AT5G63590.1 18467451
AT5G13930.1 KRH18787 AT5G63590.1 18467451
AT5G13930.1 KRH53203 AT5G63590.1 18467451
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH42776 Soybean cytosol 65.46 99.61
KRH42758 Soybean cytosol 99.48 99.48
KRH42783 Soybean cytosol 99.48 99.48
KRH42780 Soybean cytosol 99.48 99.48
KRH42775 Soybean cytosol 99.48 99.48
KRH42778 Soybean cytosol 99.48 99.48
KRH42757 Soybean cytosol 99.23 99.23
KRH58872 Soybean cytosol 99.23 99.23
KRH42760 Soybean cytosol 98.97 98.97
KRH75544 Soybean cytosol 97.42 97.42
KRH37579 Soybean cytosol 97.16 97.16
KRH71115 Soybean cytosol 96.65 96.65
KRH27737 Soybean cytosol 91.24 91.0
KRH77699 Soybean endoplasmic reticulum 90.21 89.97
KRG94730 Soybean cytosol 85.82 85.17
GSMUA_Achr6P16370_001 Banana cytosol, mitochondrion, plastid 68.56 84.98
CDY09836 Canola cytosol 84.54 83.04
CDX69618 Canola cytosol 84.54 83.04
CDX78547 Canola cytosol 84.28 82.99
EES09858 Sorghum cytosol 85.57 82.79
GSMUA_Achr6P10910_001 Banana cytosol, mitochondrion 69.85 82.62
CDX91090 Canola cytosol 84.28 82.58
CDX70528 Canola cytosol 84.28 82.58
Bra008792.1-P Field mustard cytosol 84.02 82.53
AT5G13930.1 Thale cress cytosol 84.02 82.53
EES09865 Sorghum cytosol 85.05 82.29
EES09864 Sorghum cytosol 84.79 82.25
Bra006224.1-P Field mustard cytosol 83.76 82.07
KXG29016 Sorghum cytosol 84.79 82.04
EES08604 Sorghum cytosol 84.79 82.04
EES09859 Sorghum cytosol 84.79 82.04
EES09860 Sorghum cytosol 84.79 82.04
EES09862 Sorghum cytosol 84.79 82.04
Zm00001d052673_P001 Maize cytosol 84.54 82.0
TraesCS2A01G035300.1 Wheat cytosol 83.25 81.98
TraesCS2A01G025600.1 Wheat cytosol 83.25 81.98
Bra023441.1-P Field mustard cytosol 83.25 81.98
TraesCS2D01G027700.1 Wheat cytosol 83.25 81.98
GSMUA_Achr10P... Banana cytosol 68.3 81.79
TraesCS2B01G558400.1 Wheat cytosol 83.76 81.66
EES09863 Sorghum cytosol 84.28 81.55
TraesCS2A01G025700.1 Wheat cytosol, golgi 82.73 81.47
TraesCS2B01G038700.1 Wheat cytosol 82.73 81.47
TraesCS2A01G527700.2 Wheat cytosol 83.51 81.41
Os11t0530600-01 Rice cytosol, mitochondrion, plasma membrane 83.51 81.41
HORVU2Hr1G005220.3 Barley cytosol 82.73 81.27
TraesCS2A01G025500.1 Wheat cytosol 82.47 81.22
TraesCS2B01G048400.1 Wheat cytosol 82.47 81.22
TraesCS2D01G027900.2 Wheat cytosol 82.47 81.22
HORVU2Hr1G116390.2 Barley cytosol 83.25 81.16
TraesCS2D01G034500.1 Wheat cytosol 82.47 81.01
Zm00001d007403_P001 Maize cytosol 83.51 80.8
Bra020688.1-P Field mustard cytosol 81.7 80.46
TraesCS2B01G038600.1 Wheat cytosol 75.0 80.39
CDY51056 Canola cytosol 81.19 79.95
TraesCS2B01G613100.1 Wheat cytosol 81.44 79.2
TraesCS2D01G027800.1 Wheat cytosol 43.04 79.15
CDY05664 Canola cytosol 79.9 78.68
Bra036307.1-P Field mustard cytosol 79.38 78.37
TraesCS5D01G488700.1 Wheat cytosol 79.38 77.97
TraesCS5D01G488600.1 Wheat cytosol 79.38 77.97
TraesCS1B01G041000.1 Wheat cytosol 76.03 74.68
TraesCS1B01G040300.1 Wheat cytosol, mitochondrion 75.77 74.43
HORVU2Hr1G004170.4 Barley plastid 82.99 74.36
TraesCS1B01G040000.1 Wheat cytosol, mitochondrion 75.52 74.18
CDY07114 Canola cytosol 78.09 73.9
TraesCS1A01G032100.1 Wheat cytosol 75.0 73.67
TraesCS1B01G040100.1 Wheat cytosol 75.0 73.67
TraesCS1A01G032300.1 Wheat cytosol 75.52 73.62
TraesCS1B01G040200.1 Wheat cytosol, mitochondrion 76.03 73.38
EES14634 Sorghum cytosol 75.26 73.37
TraesCS1D01G033600.1 Wheat cytosol 75.0 72.93
TraesCS1B01G040500.1 Wheat cytosol 75.0 72.93
TraesCS1D01G033800.1 Wheat cytosol 74.48 72.61
HORVU1Hr1G089540.1 Barley mitochondrion 74.48 72.43
HORVU1Hr1G004830.1 Barley cytosol 73.97 72.29
GSMUA_Achr10P... Banana mitochondrion 62.89 71.14
Os07t0214900-00 Rice cytosol 72.94 70.22
TraesCS2D01G530600.1 Wheat cytosol, plastid 83.51 67.78
KRH18039 Soybean cytosol 54.12 66.04
CDY05666 Canola mitochondrion 71.13 66.03
KRH29108 Soybean cytosol 41.24 41.34
KRH75257 Soybean cytosol 39.69 39.69
KRH24136 Soybean cytosol 35.31 36.34
Protein Annotations
KEGG:00941+2.3.1.74Gene3D:3.40.47.10EntrezGene:732575MapMan:9.2.2.1.1.1ProteinID:AAQ62590.1ProteinID:AAQ62597.1
ProteinID:BAB71954.1ProteinID:BAF62128.1ProteinID:BAH70473.1ProteinID:BAH70474.1ProteinID:CAA38456.1InterPro:Chalcone/stilbene_synth_C
InterPro:Chalcone/stilbene_synthase_ASInterPro:Chalcone/stilbene_synthase_NEnsemblPlantsGene:GLYMA_08G109400GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009813GO:GO:0016210GO:GO:0016740GO:GO:0016746
GO:GO:0016747InterPro:IPR016039EnsemblPlants:KRH42759ProteinID:KRH42759ProteinID:KRH42759.1UniProt:P24826
PFAM:PF00195PFAM:PF02797PIRSF:PIRSF000451ScanProsite:PS00441PANTHER:PTHR11877PANTHER:PTHR11877:SF43
MetaCyc:PWY-5135MetaCyc:PWY-6316MetaCyc:PWY-6787MetaCyc:PWY-7397InterPro:Polyketide_synthase_type-IIIUniProt:Q6X0M8
SUPFAM:SSF53901InterPro:Thiolase-likeUniParc:UPI0000001099:::
Description
CHS1hypothetical protein
Coordinates
chr8:+:8390446..8393922
Molecular Weight (calculated)
42518.8 Da
IEP (calculated)
6.626
GRAVY (calculated)
-0.055
Length
388 amino acids
Sequence
(BLAST)
001: MVSVEEIRKA QRAEGPATVM AIGTATPPNC VDQSTYPDYY FRITNSEHMT ELKEKFKRMC DKSMIKKRYM YLNEEILKEN PSVCAYMAPS LDARQDMVVV
101: EVPKLGKEAA TKAIKEWGQP KSKITHLIFC TTSGVDMPGA DYQLTKLLGL RPSVKRYMMY QQGCFAGGTV LRLAKDLAEN NKGARVLVVC SEITAVTFRG
201: PTDTHLDSLV GQALFGDGAA AVIVGSDPLP VEKPLFQLVW TAQTILPDSE GAIDGHLREV GLTFHLLKDV PGLISKNIEK ALVEAFQPLG ISDYNSIFWI
301: AHPGGPAILD QVEAKLGLKP EKMEATRHVL SEYGNMSSAC VLFILDQMRK KSIENGLGTT GEGLDWGVLF GFGPGLTVET VVLRSVTL
Best Arabidopsis Sequence Match ( AT5G13930.1 )
(BLAST)
001: MVMAGASSLD EIRQAQRADG PAGILAIGTA NPENHVLQAE YPDYYFRITN SEHMTDLKEK FKRMCDKSTI RKRHMHLTEE FLKENPHMCA YMAPSLDTRQ
101: DIVVVEVPKL GKEAAVKAIK EWGQPKSKIT HVVFCTTSGV DMPGADYQLT KLLGLRPSVK RLMMYQQGCF AGGTVLRIAK DLAENNRGAR VLVVCSEITA
201: VTFRGPSDTH LDSLVGQALF SDGAAALIVG SDPDTSVGEK PIFEMVSAAQ TILPDSDGAI DGHLREVGLT FHLLKDVPGL ISKNIVKSLD EAFKPLGISD
301: WNSLFWIAHP GGPAILDQVE IKLGLKEEKM RATRHVLSEY GNMSSACVLF ILDEMRRKSA KDGVATTGEG LEWGVLFGFG PGLTVETVVL HSVPL
Arabidopsis Description
CHSTT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UKS9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.