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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • cytosol 4
  • vacuole 1
  • golgi 1
  • plastid 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, golgi, mitochondrion, plastid, vacuole
BaCelLo:cytosol
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:cytosol, golgi, plastid
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG92978
KRG94730
KRH16579
KRH18787
KRH27737
KRH37579
KRH42757
KRH42758
KRH42759
KRH42760
KRH42775
KRH42776
KRH42778
KRH42780
KRH42783
KRH53203
KRH58872
KRH71115
KRH75544
KRH77699

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G42800.1 KRG92978 AT3G55120.1 10536025
AT5G42800.1 KRH16579 AT5G08640.1 18467451
AT5G42800.1 KRH18787 AT5G08640.1 18467451
AT5G42800.1 KRH53203 AT5G08640.1 18467451
AT5G42800.1 KRG94730 AT5G13930.1 10536025
AT5G42800.1 KRH27737 AT5G13930.1 10536025
AT5G42800.1 KRH37579 AT5G13930.1 10536025
AT5G42800.1 KRH42757 AT5G13930.1 10536025
AT5G42800.1 KRH42758 AT5G13930.1 10536025
AT5G42800.1 KRH42759 AT5G13930.1 10536025
AT5G42800.1 KRH42760 AT5G13930.1 10536025
AT5G42800.1 KRH42775 AT5G13930.1 10536025
AT5G42800.1 KRH42776 AT5G13930.1 10536025
AT5G42800.1 KRH42778 AT5G13930.1 10536025
AT5G42800.1 KRH42780 AT5G13930.1 10536025
AT5G42800.1 KRH42783 AT5G13930.1 10536025
AT5G42800.1 KRH58872 AT5G13930.1 10536025
AT5G42800.1 KRH71115 AT5G13930.1 10536025
AT5G42800.1 KRH75544 AT5G13930.1 10536025
AT5G42800.1 KRH77699 AT5G13930.1 10536025
AT5G42800.1 KRG94730 AT5G13930.1 21669202
AT5G42800.1 KRH27737 AT5G13930.1 21669202
AT5G42800.1 KRH37579 AT5G13930.1 21669202
AT5G42800.1 KRH42757 AT5G13930.1 21669202
AT5G42800.1 KRH42758 AT5G13930.1 21669202
AT5G42800.1 KRH42759 AT5G13930.1 21669202
AT5G42800.1 KRH42760 AT5G13930.1 21669202
AT5G42800.1 KRH42775 AT5G13930.1 21669202
AT5G42800.1 KRH42776 AT5G13930.1 21669202
AT5G42800.1 KRH42778 AT5G13930.1 21669202
AT5G42800.1 KRH42780 AT5G13930.1 21669202
AT5G42800.1 KRH42783 AT5G13930.1 21669202
AT5G42800.1 KRH58872 AT5G13930.1 21669202
AT5G42800.1 KRH71115 AT5G13930.1 21669202
AT5G42800.1 KRH75544 AT5G13930.1 21669202
AT5G42800.1 KRH77699 AT5G13930.1 21669202
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH15169 Soybean plastid 81.42 79.31
KRH05848 Soybean plastid 73.45 70.34
KRH05851 Soybean extracellular 25.37 69.35
VIT_18s0001g12800.t01 Wine grape endoplasmic reticulum, golgi, plasma membrane, plastid 69.03 62.4
EES01135 Sorghum cytosol 59.29 57.43
Zm00001d044122_P001 Maize plastid 59.29 56.3
AT5G42800.1 Thale cress cytosol 63.42 56.28
EES19023 Sorghum cytosol, peroxisome, plastid 59.88 56.08
GSMUA_Achr4P24540_001 Banana cytosol, golgi, plastid 58.11 55.97
TraesCS3D01G224600.1 Wheat cytosol, extracellular, plastid 57.23 54.8
EES04562 Sorghum plastid 58.11 54.42
Bra027457.1-P Field mustard cytosol 61.65 54.29
CDY52372 Canola cytosol 61.65 54.29
CDX95155 Canola cytosol 61.36 54.03
PGSC0003DMT400009287 Potato cytosol 60.77 53.93
HORVU3Hr1G056560.2 Barley cytosol 56.05 53.67
TraesCS3A01G226600.1 Wheat nucleus 56.05 53.67
Solyc02g085020.2.1 Tomato cytosol 59.59 53.3
Zm00001d011438_P001 Maize extracellular 56.64 53.19
EES01136 Sorghum plastid 60.77 52.96
CDY21246 Canola cytosol 36.58 50.82
Os01t0633500-00 Rice cytosol, mitochondrion, plasma membrane, plastid 47.2 50.47
TraesCS3B01G257900.2 Wheat plastid 57.23 50.26
KRH20841 Soybean cytosol 43.07 44.92
KRH40604 Soybean peroxisome 41.89 43.56
KRH27495 Soybean mitochondrion 41.3 42.3
KRH40606 Soybean cytosol 40.71 42.2
KRH00562 Soybean cytosol 40.12 41.59
KRH41990 Soybean cytosol, extracellular 41.3 41.54
KRH40605 Soybean cytosol 39.82 41.28
KRH27494 Soybean cytosol, endoplasmic reticulum, peroxisome 39.82 41.28
KRH27122 Soybean cytosol 41.89 39.55
KRH41993 Soybean golgi 38.35 38.46
HORVU6Hr1G048650.1 Barley endoplasmic reticulum, plasma membrane 17.7 37.74
HORVU6Hr1G047380.1 Barley peroxisome 17.4 37.34
KRH00563 Soybean cytosol 39.82 36.29
KRH25898 Soybean cytosol, extracellular 31.56 35.91
KRH22215 Soybean cytosol 18.58 35.8
KRH55603 Soybean mitochondrion 39.82 35.62
KRH30756 Soybean plastid 12.98 32.84
KRH27492 Soybean cytosol, plastid 29.79 32.17
KRG97147 Soybean cytosol, nucleus 31.56 31.47
KRH68896 Soybean cytosol 30.97 30.52
KRG97148 Soybean cytosol 30.38 29.94
Protein Annotations
EMBL:ACUP02000918EMBL:BT099409EnsemblPlants:KRH71611EnsemblPlantsGene:GLYMA_02G158700EntrezGene:100778253Gene3D:3.40.50.720
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0050662InterPro:Epimerase_deHydtaseInterPro:NAD(P)-bd_dom_sf
PANTHER:PTHR10366PANTHER:PTHR10366:SF276PFAM:PF01370ProteinID:KRH71611ProteinID:KRH71611.1ProteinID:KRH71612.1
SUPFAM:SSF51735UniParc:UPI000059757AUniProt:C6TNS8MapMan:9.2.2.9.1::
Description
hypothetical protein
Coordinates
chr2:-:17453873..17459197
Molecular Weight (calculated)
37952.1 Da
IEP (calculated)
6.421
GRAVY (calculated)
-0.055
Length
339 amino acids
Sequence
(BLAST)
001: MGSKSETVCV TGASGYIGSW LVMRLIERGY TVRATVLDPA DMREVKHLLD LPGAESKLSL WKAELTEEGS FDEAIKGCTG VFHLATPVDF KSKDPENEMI
101: KPTIQGVLNI MKACLKAKTV RRLVFTSSAG TTNITEHQKP IIDETCWTDV EFCRRLNMTG WMYFVSKTLA EKEAWKFAKE HGMDFIAILP ALVIGPFLLP
201: TIPSSVISAL SPINGIEAHY SIIKQAQFVH IEDICLAHIF LFEQPKAEGR YICSACDVTI HDIVKLINEK YPEYKVPTKF QNIPDQLEPV RFSSKKITDL
301: GFQFKYSLED MYTGAIDTCI EKGLLPKPAE IPANGIEHK
Best Arabidopsis Sequence Match ( AT5G42800.1 )
(BLAST)
001: MVSQKETVCV TGASGFIGSW LVMRLLERGY FVRATVRDPG NLKKVQHLLD LPNAKTLLTL WKADLSEEGS YDDAINGCDG VFHVATPMDF ESKDPENEVI
101: KPTVNGMLGI MKACVKAKTV RRFVFTSSAG TVNVEEHQKN VYDENDWSDL EFIMSKKMTG WMYFVSKTLA EKAAWDFAEE KGLDFISIIP TLVVGPFITT
201: SMPPSLITAL SPITRNEAHY SIIRQGQYVH LDDLCNAHIF LYEQAAAKGR YICSSHDATI LTISKFLRPK YPEYNVPSTF EGVDENLKSI EFSSKKLTDM
301: GFNFKYSLEE MFIESIETCR QKGFLPVSLS YQSISEIKTK NENIDVKTGD GLTDGMKPCN KTETGITGER TDAPMLAQQM CA
Arabidopsis Description
DFRADihydroflavonol reductase [Source:UniProtKB/TrEMBL;Acc:B1GV15]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.