CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, peroxisome

Predictor Summary:

cytosol 2
plastid 1
golgi 1
mitochondrion 1
endoplasmic reticulum 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20841	Soybean	cytosol	77.68	78.15
KRH27495	Soybean	mitochondrion	78.9	77.95
KRH40604	Soybean	peroxisome	68.5	68.71
KRH40606	Soybean	cytosol	63.3	63.3
KRH00562	Soybean	cytosol	62.69	62.69
KRH40605	Soybean	cytosol	60.55	60.55
VIT_15s0048g01000.t01	Wine grape	cytosol, peroxisome, plastid	58.1	57.75
VIT_15s0048g00980.t01	Wine grape	golgi, peroxisome, plastid	57.19	57.19
VIT_15s0048g01010.t01	Wine grape	extracellular	57.49	56.12
VIT_15s0048g00990.t01	Wine grape	cytosol, golgi, peroxisome	55.66	55.66
Solyc05g051010.2.1	Tomato	cytosol, endoplasmic reticulum	26.91	53.66
KRH00563	Soybean	cytosol	60.55	53.23
KRH27492	Soybean	cytosol, plastid	49.54	51.59
PGSC0003DMT400018059	Potato	cytosol	51.99	51.36
Bra004907.1-P	Field mustard	cytosol	47.71	50.0
Solyc01g094070.2.1	Tomato	cytosol	48.93	49.38
CDY37037	Canola	mitochondrion	47.09	49.36
CDX74737	Canola	cytosol	51.68	48.01
CDY72000	Canola	cytosol	51.68	48.01
PGSC0003DMT400060967	Potato	cytosol	43.43	47.49
Bra040313.1-P	Field mustard	cytosol, golgi, plastid	51.07	46.65
CDY57107	Canola	cytosol, peroxisome, plastid	51.07	46.65
Solyc05g051020.2.1	Tomato	cytosol, plastid	16.82	46.61
AT2G45400.1	Thale cress	cytosol	51.38	46.15
PGSC0003DMT400087830	Potato	cytosol	26.3	43.88
KRH15169	Soybean	plastid	43.12	40.52
PGSC0003DMT400068748	Potato	cytoskeleton, cytosol, peroxisome	37.31	40.0
KRH71611	Soybean	nucleus	41.28	39.82
Solyc10g018140.1.1	Tomato	cytosol	29.97	39.04
KRH41990	Soybean	cytosol, extracellular	38.53	37.39
KRH05848	Soybean	plastid	40.37	37.29
KRH41993	Soybean	golgi	38.23	36.98
KRH05851	Soybean	extracellular	13.76	36.29
KRH27122	Soybean	cytosol	38.84	35.38
KRH25898	Soybean	cytosol, extracellular	30.89	33.89
KRH22215	Soybean	cytosol	17.43	32.39
KRH30756	Soybean	plastid	13.15	32.09
KRH68896	Soybean	cytosol	33.64	31.98
KRH55603	Soybean	mitochondrion	37.0	31.93
KRG97147	Soybean	cytosol, nucleus	33.03	31.76
KRG97148	Soybean	cytosol	33.33	31.69

Protein Annotations

EMBL:ACUP02007810	EnsemblPlants:KRH27494	EnsemblPlantsGene:GLYMA_12G238100	EntrezGene:100786878	Gene3D:3.40.50.720	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366
PANTHER:PTHR10366:SF558	PFAM:PF01370	ProteinID:KRH27494	ProteinID:KRH27494.1	SUPFAM:SSF51735	UniParc:UPI000233CD48
UniProt:I1LVE5	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:-:39720595..39722785

Molecular Weight (calculated)

36172.1 Da

IEP (calculated)

4.729

GRAVY (calculated)

-0.050

Length

327 amino acids

Sequence
(BLAST)

001: MEESKGRVCV TGGAGYIASW IIKRLLQDGY SVNTTVRPDP VHEEDASFLY YLPGASQRLQ VFNADLNIPE SFSAAIEGCI GVFHVATPVD FESKEPEEIV
101: SKRSIDGALG ILKACLNSKS AKRVVYTSSS SAVFYNGKEE EVMDENFWSD VDYLRSSKPF GWPYAVSKTL TEMAVLEFGE QNGLDVVTLI PTFVFGPFIC
201: PKLPSSVDAT LNFAFGDKGP FGLLLQAPMV HVDDVARAYI FLLEHSNLKG RYNCSQCLVT HERISELVSA KYQKFQPQTV DSLKQIEGIK LSDLSSKKLI
301: DAGFVFKCGL EEMVDDAIQC CQEKGYI

Best Arabidopsis Sequence Match ( AT2G45400.1 )
(BLAST)

001: MVREEQEEDD NNNNNNGGGE RKLLVADETV PSLLDETGLV CVTGGSGFVA SWLIMRLLQR GYSVRATVRT NSEGNKKDIS YLTELPFASE RLQIFTADLN
101: EPESFKPAIE GCKAVFHVAH PMDPNSNETE ETVTKRTVQG LMGILKSCLD AKTVKRFFYT SSAVTVFYSG GNGGGGGEVD ESVWSDVEVF RNQKEKRVSS
201: SYVVSKMAAE TAALEFGGKN GLEVVTLVIP LVVGPFISSS LPSSVFISLA MLFGNYKEKY LFDTYNMVHI DDVARAMIFL LEKPVAKGRY ICSSVEMKID
301: EVFEFLSTKF PQFQLPSIDL NKYKVEKRMG LSSKKLKSAG FEFKYGAEEI FSGAIRSCQA RGFL

Arabidopsis Description

BEN1Protein BRI1-5 ENHANCED 1 [Source:UniProtKB/Swiss-Prot;Acc:O22133]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.