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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • plastid 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 2
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc05g051010.2.1 Tomato cytosol, endoplasmic reticulum 29.01 57.32
VIT_15s0048g00980.t01 Wine grape golgi, peroxisome, plastid 56.48 55.96
VIT_15s0048g01000.t01 Wine grape cytosol, peroxisome, plastid 56.48 55.62
VIT_15s0048g00990.t01 Wine grape cytosol, golgi, peroxisome 55.86 55.35
Solyc05g051020.2.1 Tomato cytosol, plastid 20.06 55.08
VIT_15s0048g01010.t01 Wine grape extracellular 55.56 53.73
KRH20841 Soybean cytosol 53.09 52.92
KRH40604 Soybean peroxisome 52.16 51.84
KRH27495 Soybean mitochondrion 52.16 51.06
KRH00562 Soybean cytosol 50.31 49.85
KRH40606 Soybean cytosol 50.0 49.54
KRH27494 Soybean cytosol, endoplasmic reticulum, peroxisome 49.38 48.93
KRH40605 Soybean cytosol 47.84 47.4
PGSC0003DMT400060967 Potato cytosol 43.21 46.82
Bra004907.1-P Field mustard cytosol 44.44 46.15
CDY72000 Canola cytosol 49.07 45.17
CDX74737 Canola cytosol 48.77 44.89
CDY37037 Canola mitochondrion 43.21 44.87
AT2G45400.1 Thale cress cytosol 48.77 43.41
CDY57107 Canola cytosol, peroxisome, plastid 47.53 43.02
Bra040313.1-P Field mustard cytosol, golgi, plastid 46.6 42.18
KRH00563 Soybean cytosol 48.15 41.94
Solyc04g071740.1.1 Tomato extracellular 16.05 41.27
Solyc10g018140.1.1 Tomato cytosol 30.86 39.84
Solyc03g031470.2.1 Tomato golgi 38.89 37.72
KRH27492 Soybean cytosol, plastid 36.42 37.58
Solyc02g085020.2.1 Tomato cytosol 41.05 35.09
Solyc12g005350.1.1 Tomato cytosol 35.8 34.02
Solyc10g009500.2.1 Tomato cytosol 17.28 30.11
Solyc04g015590.2.1 Tomato cytosol 16.36 29.94
Solyc10g009540.1.1 Tomato cytosol 22.22 27.17
Solyc10g009510.1.1 Tomato cytosol 8.02 27.08
Solyc10g009520.2.1 Tomato mitochondrion 17.9 25.89
Protein Annotations
EnsemblPlants:Solyc01g094070.2.1EnsemblPlantsGene:Solyc01g094070.2Gene3D:3.40.50.720GO:GO:0003674GO:GO:0003824GO:GO:0003854
GO:GO:0006629GO:GO:0006694GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0016491
GO:GO:0016616GO:GO:0055114InterPro:3Beta_OHSteriod_DH/EstaseInterPro:NAD(P)-bd_dom_sfPANTHER:PTHR10366PANTHER:PTHR10366:SF563
PFAM:PF01073SUPFAM:SSF51735UniParc:UPI00027685C9UniProt:K4AZE8MapMan:35.1:
Description
No Description!
Coordinates
chr1:+:85657918..85659679
Molecular Weight (calculated)
36657.3 Da
IEP (calculated)
6.507
GRAVY (calculated)
-0.029
Length
324 amino acids
Sequence
(BLAST)
001: MEIKEMGRVC VTGFVGSWLI MRLLQRGYSV NTTIRSHPDR NRDIKYLTKL EGASERLQIF NADMNKPQSF TAAIEGCVGV FHVAQPMDFE KEEVDEIKVK
101: SVITATLGIL QACVDSKTVK RVVYTSSVAS VIFNDKGLDE SSWSDVDFIK FAKPFLLCYS TCKTLTEKAA IEFAAKNRLH LVSVAASWIH GPFITPHCPF
201: TVQIFLDIIF RNGEEGVLEQ QKYIPFVHVD DVVNAHIFLF EHSNANGRYI CSSGETTIFE LSKFLSARYP QYEIPIIEGS MEGLKYPKLS VKKLLDTGFE
301: FKYYGQLEEM YDGAIECCKT RGLL
Best Arabidopsis Sequence Match ( AT2G45400.1 )
(BLAST)
001: MVREEQEEDD NNNNNNGGGE RKLLVADETV PSLLDETGLV CVTGGSGFVA SWLIMRLLQR GYSVRATVRT NSEGNKKDIS YLTELPFASE RLQIFTADLN
101: EPESFKPAIE GCKAVFHVAH PMDPNSNETE ETVTKRTVQG LMGILKSCLD AKTVKRFFYT SSAVTVFYSG GNGGGGGEVD ESVWSDVEVF RNQKEKRVSS
201: SYVVSKMAAE TAALEFGGKN GLEVVTLVIP LVVGPFISSS LPSSVFISLA MLFGNYKEKY LFDTYNMVHI DDVARAMIFL LEKPVAKGRY ICSSVEMKID
301: EVFEFLSTKF PQFQLPSIDL NKYKVEKRMG LSSKKLKSAG FEFKYGAEEI FSGAIRSCQA RGFL
Arabidopsis Description
BEN1Protein BRI1-5 ENHANCED 1 [Source:UniProtKB/Swiss-Prot;Acc:O22133]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.