Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 2
- mitochondrion 2
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc05g051010.2.1 | Tomato | cytosol, endoplasmic reticulum | 29.01 | 57.32 |
VIT_15s0048g00980.t01 | Wine grape | golgi, peroxisome, plastid | 56.48 | 55.96 |
VIT_15s0048g01000.t01 | Wine grape | cytosol, peroxisome, plastid | 56.48 | 55.62 |
VIT_15s0048g00990.t01 | Wine grape | cytosol, golgi, peroxisome | 55.86 | 55.35 |
Solyc05g051020.2.1 | Tomato | cytosol, plastid | 20.06 | 55.08 |
VIT_15s0048g01010.t01 | Wine grape | extracellular | 55.56 | 53.73 |
KRH20841 | Soybean | cytosol | 53.09 | 52.92 |
KRH40604 | Soybean | peroxisome | 52.16 | 51.84 |
KRH27495 | Soybean | mitochondrion | 52.16 | 51.06 |
KRH00562 | Soybean | cytosol | 50.31 | 49.85 |
KRH40606 | Soybean | cytosol | 50.0 | 49.54 |
KRH27494 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 49.38 | 48.93 |
KRH40605 | Soybean | cytosol | 47.84 | 47.4 |
PGSC0003DMT400060967 | Potato | cytosol | 43.21 | 46.82 |
Bra004907.1-P | Field mustard | cytosol | 44.44 | 46.15 |
CDY72000 | Canola | cytosol | 49.07 | 45.17 |
CDX74737 | Canola | cytosol | 48.77 | 44.89 |
CDY37037 | Canola | mitochondrion | 43.21 | 44.87 |
AT2G45400.1 | Thale cress | cytosol | 48.77 | 43.41 |
CDY57107 | Canola | cytosol, peroxisome, plastid | 47.53 | 43.02 |
Bra040313.1-P | Field mustard | cytosol, golgi, plastid | 46.6 | 42.18 |
KRH00563 | Soybean | cytosol | 48.15 | 41.94 |
Solyc04g071740.1.1 | Tomato | extracellular | 16.05 | 41.27 |
Solyc10g018140.1.1 | Tomato | cytosol | 30.86 | 39.84 |
Solyc03g031470.2.1 | Tomato | golgi | 38.89 | 37.72 |
KRH27492 | Soybean | cytosol, plastid | 36.42 | 37.58 |
Solyc02g085020.2.1 | Tomato | cytosol | 41.05 | 35.09 |
Solyc12g005350.1.1 | Tomato | cytosol | 35.8 | 34.02 |
Solyc10g009500.2.1 | Tomato | cytosol | 17.28 | 30.11 |
Solyc04g015590.2.1 | Tomato | cytosol | 16.36 | 29.94 |
Solyc10g009540.1.1 | Tomato | cytosol | 22.22 | 27.17 |
Solyc10g009510.1.1 | Tomato | cytosol | 8.02 | 27.08 |
Solyc10g009520.2.1 | Tomato | mitochondrion | 17.9 | 25.89 |
Protein Annotations
EnsemblPlants:Solyc01g094070.2.1 | EnsemblPlantsGene:Solyc01g094070.2 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003854 |
GO:GO:0006629 | GO:GO:0006694 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016491 |
GO:GO:0016616 | GO:GO:0055114 | InterPro:3Beta_OHSteriod_DH/Estase | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF563 |
PFAM:PF01073 | SUPFAM:SSF51735 | UniParc:UPI00027685C9 | UniProt:K4AZE8 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr1:+:85657918..85659679
Molecular Weight (calculated)
36657.3 Da
IEP (calculated)
6.507
GRAVY (calculated)
-0.029
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIKEMGRVC VTGFVGSWLI MRLLQRGYSV NTTIRSHPDR NRDIKYLTKL EGASERLQIF NADMNKPQSF TAAIEGCVGV FHVAQPMDFE KEEVDEIKVK
101: SVITATLGIL QACVDSKTVK RVVYTSSVAS VIFNDKGLDE SSWSDVDFIK FAKPFLLCYS TCKTLTEKAA IEFAAKNRLH LVSVAASWIH GPFITPHCPF
201: TVQIFLDIIF RNGEEGVLEQ QKYIPFVHVD DVVNAHIFLF EHSNANGRYI CSSGETTIFE LSKFLSARYP QYEIPIIEGS MEGLKYPKLS VKKLLDTGFE
301: FKYYGQLEEM YDGAIECCKT RGLL
101: SVITATLGIL QACVDSKTVK RVVYTSSVAS VIFNDKGLDE SSWSDVDFIK FAKPFLLCYS TCKTLTEKAA IEFAAKNRLH LVSVAASWIH GPFITPHCPF
201: TVQIFLDIIF RNGEEGVLEQ QKYIPFVHVD DVVNAHIFLF EHSNANGRYI CSSGETTIFE LSKFLSARYP QYEIPIIEGS MEGLKYPKLS VKKLLDTGFE
301: FKYYGQLEEM YDGAIECCKT RGLL
001: MVREEQEEDD NNNNNNGGGE RKLLVADETV PSLLDETGLV CVTGGSGFVA SWLIMRLLQR GYSVRATVRT NSEGNKKDIS YLTELPFASE RLQIFTADLN
101: EPESFKPAIE GCKAVFHVAH PMDPNSNETE ETVTKRTVQG LMGILKSCLD AKTVKRFFYT SSAVTVFYSG GNGGGGGEVD ESVWSDVEVF RNQKEKRVSS
201: SYVVSKMAAE TAALEFGGKN GLEVVTLVIP LVVGPFISSS LPSSVFISLA MLFGNYKEKY LFDTYNMVHI DDVARAMIFL LEKPVAKGRY ICSSVEMKID
301: EVFEFLSTKF PQFQLPSIDL NKYKVEKRMG LSSKKLKSAG FEFKYGAEEI FSGAIRSCQA RGFL
101: EPESFKPAIE GCKAVFHVAH PMDPNSNETE ETVTKRTVQG LMGILKSCLD AKTVKRFFYT SSAVTVFYSG GNGGGGGEVD ESVWSDVEVF RNQKEKRVSS
201: SYVVSKMAAE TAALEFGGKN GLEVVTLVIP LVVGPFISSS LPSSVFISLA MLFGNYKEKY LFDTYNMVHI DDVARAMIFL LEKPVAKGRY ICSSVEMKID
301: EVFEFLSTKF PQFQLPSIDL NKYKVEKRMG LSSKKLKSAG FEFKYGAEEI FSGAIRSCQA RGFL
Arabidopsis Description
BEN1Protein BRI1-5 ENHANCED 1 [Source:UniProtKB/Swiss-Prot;Acc:O22133]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.