Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 1
- extracellular 3
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_15s0048g00980.t01 | Wine grape | golgi, peroxisome, plastid | 77.31 | 79.2 |
| VIT_15s0048g00990.t01 | Wine grape | cytosol, golgi, peroxisome | 76.72 | 78.59 |
| VIT_15s0048g01000.t01 | Wine grape | cytosol, peroxisome, plastid | 74.63 | 75.99 |
| Solyc05g051010.2.1 | Tomato | cytosol, endoplasmic reticulum | 32.24 | 65.85 |
| KRH20841 | Soybean | cytosol | 59.7 | 61.54 |
| PGSC0003DMT400018059 | Potato | cytosol | 60.6 | 61.33 |
| KRH40604 | Soybean | peroxisome | 58.81 | 60.43 |
| KRH27495 | Soybean | mitochondrion | 59.4 | 60.12 |
| KRH27494 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 56.12 | 57.49 |
| Solyc05g051020.2.1 | Tomato | cytosol, plastid | 19.7 | 55.93 |
| KRH40606 | Soybean | cytosol | 54.33 | 55.66 |
| Solyc01g094070.2.1 | Tomato | cytosol | 53.73 | 55.56 |
| KRH00562 | Soybean | cytosol | 54.03 | 55.35 |
| KRH40605 | Soybean | cytosol | 53.13 | 54.43 |
| Bra004907.1-P | Field mustard | cytosol | 49.25 | 52.88 |
| CDY37037 | Canola | mitochondrion | 48.66 | 52.24 |
| CDX74737 | Canola | cytosol | 54.33 | 51.7 |
| CDY72000 | Canola | cytosol | 54.03 | 51.42 |
| CDY57107 | Canola | cytosol, peroxisome, plastid | 54.03 | 50.56 |
| AT2G45400.1 | Thale cress | cytosol | 54.63 | 50.27 |
| Bra040313.1-P | Field mustard | cytosol, golgi, plastid | 53.43 | 50.0 |
| PGSC0003DMT400060967 | Potato | cytosol | 43.88 | 49.16 |
| KRH00563 | Soybean | cytosol | 53.43 | 48.12 |
| PGSC0003DMT400087830 | Potato | cytosol | 26.87 | 45.92 |
| KRH27492 | Soybean | cytosol, plastid | 42.69 | 45.54 |
| PGSC0003DMT400068748 | Potato | cytoskeleton, cytosol, peroxisome | 40.3 | 44.26 |
| VIT_00s0361g00040.t01 | Wine grape | endoplasmic reticulum, extracellular, golgi | 39.4 | 39.05 |
| VIT_18s0001g12800.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane, plastid | 42.99 | 38.4 |
| Solyc10g018140.1.1 | Tomato | cytosol | 28.36 | 37.85 |
| VIT_00s0361g00030.t01 | Wine grape | cytosol | 11.04 | 37.37 |
| VIT_18s0001g12790.t01 | Wine grape | cytosol | 15.82 | 37.32 |
| VIT_04s0023g02090.t01 | Wine grape | cytosol | 17.91 | 37.27 |
| VIT_18s0001g12810.t01 | Wine grape | cytosol | 45.37 | 37.07 |
| VIT_15s0046g01160.t01 | Wine grape | mitochondrion | 36.42 | 35.99 |
| VIT_18s0001g12820.t01 | Wine grape | cytosol | 43.58 | 34.35 |
| VIT_15s0046g01150.t01 | Wine grape | cytosol | 24.78 | 34.16 |
| VIT_19s0014g04980.t01 | Wine grape | golgi, plasma membrane, plastid | 40.6 | 33.83 |
| VIT_02s0025g01260.t01 | Wine grape | plastid | 32.84 | 32.16 |
| VIT_15s0046g01170.t01 | Wine grape | cytosol | 32.54 | 31.23 |
Protein Annotations
| EntrezGene:100242041 | wikigene:100242041 | Gene3D:3.40.50.720 | MapMan:35.1 | ProteinID:CCB61383 | ProteinID:CCB61383.1 |
| InterPro:Epimerase_deHydtase | UniProt:F6I366 | EMBL:FN596739 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0050662 | EntrezGene:LOC100242041 | wikigene:LOC100242041 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF01370 | PANTHER:PTHR10366 |
| PANTHER:PTHR10366:SF563 | SUPFAM:SSF51735 | TIGR:TC54822 | UniParc:UPI00015CB1E5 | ArrayExpress:VIT_15s0048g01010 | EnsemblPlantsGene:VIT_15s0048g01010 |
| EnsemblPlants:VIT_15s0048g01010.t01 | unigene:Vvi.2262 | RefSeq:XP_002278819 | RefSeq:XP_002278819.1 | : | : |
Description
No Description!
Coordinates
chr15:-:15144617..15146300
Molecular Weight (calculated)
37016.6 Da
IEP (calculated)
6.001
GRAVY (calculated)
-0.054
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGEKGKVCV TGGTGFIASW LIMKLLQHGY SVNATIRSHP QIKKDIRYLT NLPGASERLQ IFKADLSEPQ SFDAAIEGCI GVFHVAHPVD FEEGEPQETV
101: IRRSVEGTLG ILKGCLKSKT VKRVVYTSST AAVVYNNKDE DIMDESSWSD IDVINSIKPL GSSYVISKTR IERAALEFAE QHGLDLVSLI PSFVVGPFIC
201: PGFPGSVHLI LAMILGNQHH YQYLKNTSMV HVDDVASAHI FLLEYPDAKG RYICSSDILT LNEMSELLSA KYPQLPIPTI DSLKEIQGFR IPGASSKKLL
301: DAGFKYKYGV DEMFEEAIQC CKEKGFLNFS PDSIS
101: IRRSVEGTLG ILKGCLKSKT VKRVVYTSST AAVVYNNKDE DIMDESSWSD IDVINSIKPL GSSYVISKTR IERAALEFAE QHGLDLVSLI PSFVVGPFIC
201: PGFPGSVHLI LAMILGNQHH YQYLKNTSMV HVDDVASAHI FLLEYPDAKG RYICSSDILT LNEMSELLSA KYPQLPIPTI DSLKEIQGFR IPGASSKKLL
301: DAGFKYKYGV DEMFEEAIQC CKEKGFLNFS PDSIS
001: MVREEQEEDD NNNNNNGGGE RKLLVADETV PSLLDETGLV CVTGGSGFVA SWLIMRLLQR GYSVRATVRT NSEGNKKDIS YLTELPFASE RLQIFTADLN
101: EPESFKPAIE GCKAVFHVAH PMDPNSNETE ETVTKRTVQG LMGILKSCLD AKTVKRFFYT SSAVTVFYSG GNGGGGGEVD ESVWSDVEVF RNQKEKRVSS
201: SYVVSKMAAE TAALEFGGKN GLEVVTLVIP LVVGPFISSS LPSSVFISLA MLFGNYKEKY LFDTYNMVHI DDVARAMIFL LEKPVAKGRY ICSSVEMKID
301: EVFEFLSTKF PQFQLPSIDL NKYKVEKRMG LSSKKLKSAG FEFKYGAEEI FSGAIRSCQA RGFL
101: EPESFKPAIE GCKAVFHVAH PMDPNSNETE ETVTKRTVQG LMGILKSCLD AKTVKRFFYT SSAVTVFYSG GNGGGGGEVD ESVWSDVEVF RNQKEKRVSS
201: SYVVSKMAAE TAALEFGGKN GLEVVTLVIP LVVGPFISSS LPSSVFISLA MLFGNYKEKY LFDTYNMVHI DDVARAMIFL LEKPVAKGRY ICSSVEMKID
301: EVFEFLSTKF PQFQLPSIDL NKYKVEKRMG LSSKKLKSAG FEFKYGAEEI FSGAIRSCQA RGFL
Arabidopsis Description
BEN1Protein BRI1-5 ENHANCED 1 [Source:UniProtKB/Swiss-Prot;Acc:O22133]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.