Factsheet for VIT_18s0001g12800.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plastid, plasma membrane

Predictor Summary:

plastid 4
mitochondrion 1
endoplasmic reticulum 2
golgi 3
extracellular 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plasma membrane, plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	golgi, plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15169	Soybean	plastid	68.0	73.28
KRH05848	Soybean	plastid	67.47	71.47
KRH71611	Soybean	nucleus	62.4	69.03
VIT_04s0023g02090.t01	Wine grape	cytosol	29.07	67.7
VIT_18s0001g12790.t01	Wine grape	cytosol	24.8	65.49
EES01135	Sorghum	cytosol	60.53	64.86
GSMUA_Achr4P24540_001	Banana	cytosol, golgi, plastid	60.53	64.49
Zm00001d044122_P001	Maize	plastid	59.47	62.47
TraesCS3D01G224600.1	Wheat	cytosol, extracellular, plastid	58.93	62.43
TraesCS3A01G226600.1	Wheat	nucleus	58.4	61.86
HORVU3Hr1G056560.2	Barley	cytosol	58.13	61.58
EES19023	Sorghum	cytosol, peroxisome, plastid	59.2	61.33
Zm00001d011438_P001	Maize	extracellular	58.4	60.66
EES04562	Sorghum	plastid	58.13	60.22
Os01t0633500-00	Rice	cytosol, mitochondrion, plasma membrane, plastid	49.6	58.68
TraesCS3B01G257900.2	Wheat	plastid	59.47	57.77
EES01136	Sorghum	plastid	59.47	57.33
KRH05851	Soybean	extracellular	18.67	56.45
VIT_18s0001g12810.t01	Wine grape	cytosol	52.8	48.29
HORVU6Hr1G047380.1	Barley	peroxisome	20.0	47.47
HORVU6Hr1G048650.1	Barley	endoplasmic reticulum, plasma membrane	19.73	46.54
VIT_15s0048g00980.t01	Wine grape	golgi, peroxisome, plastid	40.0	45.87
VIT_00s0361g00040.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	41.33	45.86
VIT_15s0048g00990.t01	Wine grape	cytosol, golgi, peroxisome	39.2	44.95
VIT_18s0001g12820.t01	Wine grape	cytosol	50.67	44.71
VIT_15s0048g01010.t01	Wine grape	extracellular	38.4	42.99
VIT_15s0048g01000.t01	Wine grape	cytosol, peroxisome, plastid	37.6	42.86
VIT_00s0361g00030.t01	Wine grape	cytosol	9.87	37.37
VIT_19s0014g04980.t01	Wine grape	golgi, plasma membrane, plastid	40.0	37.31
VIT_02s0025g01260.t01	Wine grape	plastid	32.0	35.09
VIT_15s0046g01160.t01	Wine grape	mitochondrion	28.0	30.97
VIT_15s0046g01170.t01	Wine grape	cytosol	28.53	30.66
VIT_15s0046g01150.t01	Wine grape	cytosol	18.4	28.4

Protein Annotations

EntrezGene:100233141	wikigene:100233141	PDB:2C29	PDB:2IOD	PDB:2NNL	Gene3D:3.40.50.720
PDB:3BXX	PDB:3C1T	MapMan:9.2.2.9.1	ProteinID:AAM47527	ProteinID:AAM47527.1	ProteinID:AAX12423
ProteinID:AAX12423.1	EMBL:AF280768	EMBL:AM458763	EMBL:AY780886	ProteinID:CAA53578	ProteinID:CAA53578.1
ProteinID:CAA72420	ProteinID:CAA72420.1	ProteinID:CAN61338	ProteinID:CAN61338.1	ProteinID:CCB45962	ProteinID:CCB45962.1
EntrezGene:DFR	wikigene:DFR	InterPro:Epimerase_deHydtase	UniProt:F6H060	EMBL:FN595227	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009718	GO:GO:0009813	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0045552	GO:GO:0047890	GO:GO:0050662	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	PFAM:PF01370
PANTHER:PTHR10366	PANTHER:PTHR10366:SF276	SUPFAM:SSF51735	TIGR:TC51699	TMHMM:TMhelix	UniParc:UPI000198546A
ArrayExpress:VIT_18s0001g12800	EnsemblPlantsGene:VIT_18s0001g12800	EnsemblPlants:VIT_18s0001g12800.t01	unigene:Vvi.120	EMBL:X75964	EMBL:Y11749

Description

No Description!

Coordinates

chr18:-:10907364..10910253

Molecular Weight (calculated)

41937.7 Da

IEP (calculated)

6.774

GRAVY (calculated)

-0.084

Length

375 amino acids

Sequence
(BLAST)

001: MKSSAYIILE SARKQQNNLG LPIFLVAFIF FPGSFLRSMG SQSETVCVTG ASGFIGSWLV MRLLERGYTV RATVRDPTNV KKVKHLLDLP KAETHLTLWK
101: ADLADEGSFD EAIKGCTGVF HVATPMDFES KDPENEVIKP TIEGMLGIMK SCAAAKTVRR LVFTSSAGTV NIQEHQLPVY DESCWSDMEF CRAKKMTAWM
201: YFVSKTLAEQ AAWKYAKENN IDFITIIPTL VVGPFIMSSM PPSLITALSP ITGNEAHYSI IRQGQFVHLD DLCNAHIYLF ENPKAEGRYI CSSHDCIILD
301: LAKMLREKYP EYNIPTEFKG VDENLKSVCF SSKKLTDLGF EFKYSLEDMF TGAVDTCRAK GLLPPSHEKP VDGKT

Best Arabidopsis Sequence Match ( AT5G42800.1 )
(BLAST)

001: MVSQKETVCV TGASGFIGSW LVMRLLERGY FVRATVRDPG NLKKVQHLLD LPNAKTLLTL WKADLSEEGS YDDAINGCDG VFHVATPMDF ESKDPENEVI
101: KPTVNGMLGI MKACVKAKTV RRFVFTSSAG TVNVEEHQKN VYDENDWSDL EFIMSKKMTG WMYFVSKTLA EKAAWDFAEE KGLDFISIIP TLVVGPFITT
201: SMPPSLITAL SPITRNEAHY SIIRQGQYVH LDDLCNAHIF LYEQAAAKGR YICSSHDATI LTISKFLRPK YPEYNVPSTF EGVDENLKSI EFSSKKLTDM
301: GFNFKYSLEE MFIESIETCR QKGFLPVSLS YQSISEIKTK NENIDVKTGD GLTDGMKPCN KTETGITGER TDAPMLAQQM CA

Arabidopsis Description

DFRADihydroflavonol reductase [Source:UniProtKB/TrEMBL;Acc:B1GV15]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.