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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 1
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_05s0136g00260.t01
VIT_13s0067g03820.t01
VIT_14s0068g00920.t01
VIT_14s0068g00930.t01
VIT_18s0001g03470.t01
VIT_18s0001g03490.t01
VIT_18s0001g03510.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G42800.1 VIT_13s0067g03820.t01 AT3G55120.1 10536025
AT5G42800.1 VIT_18s0001g03470.t01 AT5G08640.1 18467451
AT5G42800.1 VIT_18s0001g03490.t01 AT5G08640.1 18467451
AT5G42800.1 VIT_18s0001g03510.t01 AT5G08640.1 18467451
AT5G42800.1 VIT_05s0136g00260.t01 AT5G13930.1 10536025
AT5G42800.1 VIT_14s0068g00920.t01 AT5G13930.1 10536025
AT5G42800.1 VIT_14s0068g00930.t01 AT5G13930.1 10536025
AT5G42800.1 VIT_05s0136g00260.t01 AT5G13930.1 21669202
AT5G42800.1 VIT_14s0068g00920.t01 AT5G13930.1 21669202
AT5G42800.1 VIT_14s0068g00930.t01 AT5G13930.1 21669202
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_18s0001g12790.t01 Wine grape cytosol 39.13 44.37
VIT_18s0001g12800.t01 Wine grape endoplasmic reticulum, golgi, plasma membrane, plastid 67.7 29.07
Os01t0633500-00 Rice cytosol, mitochondrion, plasma membrane, plastid 57.14 29.02
AT5G42800.1 Thale cress cytosol 67.08 28.27
Bra027457.1-P Field mustard cytosol 67.08 28.05
CDX95155 Canola cytosol 67.08 28.05
CDY52372 Canola cytosol 67.08 28.05
GSMUA_Achr4P24540_001 Banana cytosol, golgi, plastid 60.87 27.84
EES01135 Sorghum cytosol 60.25 27.71
PGSC0003DMT400009287 Potato cytosol 65.22 27.49
Solyc02g085020.2.1 Tomato cytosol 63.98 27.18
Zm00001d044122_P001 Maize plastid 60.25 27.17
TraesCS3D01G224600.1 Wheat cytosol, extracellular, plastid 59.01 26.84
EES19023 Sorghum cytosol, peroxisome, plastid 60.25 26.8
HORVU3Hr1G056560.2 Barley cytosol 58.39 26.55
TraesCS3A01G226600.1 Wheat nucleus 58.39 26.55
Zm00001d011438_P001 Maize extracellular 59.01 26.32
EES04562 Sorghum plastid 58.39 25.97
TraesCS3B01G257900.2 Wheat plastid 60.25 25.13
EES01136 Sorghum plastid 60.25 24.94
CDY21246 Canola cytosol 34.78 22.95
HORVU6Hr1G047380.1 Barley peroxisome 20.5 20.89
VIT_00s0361g00040.t01 Wine grape endoplasmic reticulum, extracellular, golgi 40.37 19.23
VIT_15s0046g01150.t01 Wine grape cytosol 27.33 18.11
VIT_15s0048g01010.t01 Wine grape extracellular 37.27 17.91
VIT_15s0048g00980.t01 Wine grape golgi, peroxisome, plastid 36.02 17.74
VIT_15s0048g01000.t01 Wine grape cytosol, peroxisome, plastid 36.02 17.63
VIT_18s0001g12810.t01 Wine grape cytosol 44.72 17.56
HORVU6Hr1G048650.1 Barley endoplasmic reticulum, plasma membrane 16.77 16.98
VIT_15s0048g00990.t01 Wine grape cytosol, golgi, peroxisome 32.92 16.21
VIT_18s0001g12820.t01 Wine grape cytosol 41.61 15.76
VIT_19s0014g04980.t01 Wine grape golgi, plasma membrane, plastid 35.4 14.18
VIT_02s0025g01260.t01 Wine grape plastid 29.81 14.04
VIT_15s0046g01160.t01 Wine grape mitochondrion 29.19 13.86
VIT_15s0046g01170.t01 Wine grape cytosol 29.19 13.47
VIT_00s0361g00030.t01 Wine grape cytosol 1.24 2.02
Protein Annotations
ArrayExpress:VIT_04s0023g02090EMBL:FN594959EnsemblPlants:VIT_04s0023g02090.t01EnsemblPlantsGene:VIT_04s0023g02090EntrezGene:100249667Gene3D:3.40.50.720
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0050662InterPro:Epimerase_deHydtaseInterPro:NAD(P)-bd_dom_sf
PANTHER:PTHR10366PANTHER:PTHR10366:SF276PFAM:PF01370ProteinID:CBI17488ProteinID:CBI17488.3RefSeq:XP_019074857.1
SUPFAM:SSF51735UniParc:UPI0001BE0DC3UniProt:D7SPA9MapMan:35.1::
Description
No Description!
Coordinates
chr4:-:18592883..18593688
Molecular Weight (calculated)
17779.1 Da
IEP (calculated)
4.312
GRAVY (calculated)
-0.147
Length
161 amino acids
Sequence
(BLAST)
001: MEQIEEGSFH VATPIDFESK DPENEVINPT INGVLSIIKS CAKAGSVRRL VFTSSAGTVN VEEQRPPEYD ESCWSDLEFI NDKKMPGWMY FMSTTLAEKA
101: AREASMENNI EFVSIIPTLV VGPFITPTMP PSLITALSPL TGNEAHNSIV NSEAMPIHTF R
Best Arabidopsis Sequence Match ( AT5G42800.1 )
(BLAST)
001: MVSQKETVCV TGASGFIGSW LVMRLLERGY FVRATVRDPG NLKKVQHLLD LPNAKTLLTL WKADLSEEGS YDDAINGCDG VFHVATPMDF ESKDPENEVI
101: KPTVNGMLGI MKACVKAKTV RRFVFTSSAG TVNVEEHQKN VYDENDWSDL EFIMSKKMTG WMYFVSKTLA EKAAWDFAEE KGLDFISIIP TLVVGPFITT
201: SMPPSLITAL SPITRNEAHY SIIRQGQYVH LDDLCNAHIF LYEQAAAKGR YICSSHDATI LTISKFLRPK YPEYNVPSTF EGVDENLKSI EFSSKKLTDM
301: GFNFKYSLEE MFIESIETCR QKGFLPVSLS YQSISEIKTK NENIDVKTGD GLTDGMKPCN KTETGITGER TDAPMLAQQM CA
Arabidopsis Description
DFRADihydroflavonol reductase [Source:UniProtKB/TrEMBL;Acc:B1GV15]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.