Factsheet for VIT_15s0048g00980.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plastid

Predictor Summary:

cytosol 1
plastid 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome, plastid
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0048g00990.t01	Wine grape	cytosol, golgi, peroxisome	95.11	95.11
VIT_15s0048g01010.t01	Wine grape	extracellular	79.2	77.31
VIT_15s0048g01000.t01	Wine grape	cytosol, peroxisome, plastid	77.68	77.2
Solyc05g051010.2.1	Tomato	cytosol, endoplasmic reticulum	33.33	66.46
PGSC0003DMT400018059	Potato	cytosol	62.39	61.63
KRH27495	Soybean	mitochondrion	61.77	61.03
KRH40604	Soybean	peroxisome	60.55	60.74
KRH20841	Soybean	cytosol	60.24	60.62
KRH00562	Soybean	cytosol	57.19	57.19
KRH40606	Soybean	cytosol	57.19	57.19
KRH27494	Soybean	cytosol, endoplasmic reticulum, peroxisome	57.19	57.19
Solyc01g094070.2.1	Tomato	cytosol	55.96	56.48
Solyc05g051020.2.1	Tomato	cytosol, plastid	20.18	55.93
KRH40605	Soybean	cytosol	54.74	54.74
Bra004907.1-P	Field mustard	cytosol	48.62	50.96
CDY37037	Canola	mitochondrion	48.01	50.32
PGSC0003DMT400060967	Potato	cytosol	45.87	50.17
CDX74737	Canola	cytosol	53.52	49.72
CDY72000	Canola	cytosol	53.21	49.43
KRH00563	Soybean	cytosol	55.35	48.66
CDY57107	Canola	cytosol, peroxisome, plastid	53.21	48.6
AT2G45400.1	Thale cress	cytosol	53.52	48.08
Bra040313.1-P	Field mustard	cytosol, golgi, plastid	52.6	48.04
PGSC0003DMT400087830	Potato	cytosol	28.44	47.45
KRH27492	Soybean	cytosol, plastid	43.73	45.54
PGSC0003DMT400068748	Potato	cytoskeleton, cytosol, peroxisome	40.37	43.28
Solyc10g018140.1.1	Tomato	cytosol	31.8	41.43
VIT_00s0361g00040.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	42.2	40.83
VIT_00s0361g00030.t01	Wine grape	cytosol	12.23	40.4
VIT_18s0001g12800.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane, plastid	45.87	40.0
VIT_18s0001g12810.t01	Wine grape	cytosol	46.79	37.32
VIT_18s0001g12790.t01	Wine grape	cytosol	15.9	36.62
VIT_04s0023g02090.t01	Wine grape	cytosol	17.74	36.02
VIT_18s0001g12820.t01	Wine grape	cytosol	45.87	35.29
VIT_19s0014g04980.t01	Wine grape	golgi, plasma membrane, plastid	42.2	34.33
VIT_15s0046g01160.t01	Wine grape	mitochondrion	35.17	33.92
VIT_02s0025g01260.t01	Wine grape	plastid	35.47	33.92
VIT_15s0046g01150.t01	Wine grape	cytosol	23.85	32.1
VIT_15s0046g01170.t01	Wine grape	cytosol	33.03	30.95

Protein Annotations

EntrezGene:100254019	wikigene:100254019	Gene3D:3.40.50.720	MapMan:35.1	EMBL:AM461096	ProteinID:CAN76937
ProteinID:CAN76937.1	ProteinID:CBI38847	ProteinID:CBI38847.3	UniProt:D7U7R8	InterPro:Epimerase_deHydtase	EMBL:FN596739
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0050662	EntrezGene:LOC100254019	wikigene:LOC100254019
InterPro:NAD(P)-bd_dom_sf	PFAM:PF01370	PANTHER:PTHR10366	PANTHER:PTHR10366:SF563	SUPFAM:SSF51735	UniParc:UPI00015CB1E8
ArrayExpress:VIT_15s0048g00980	EnsemblPlantsGene:VIT_15s0048g00980	EnsemblPlants:VIT_15s0048g00980.t01	unigene:Vvi.24089	RefSeq:XP_002278913	RefSeq:XP_002278913.1

Description

No Description!

Coordinates

chr15:-:15128779..15130452

Molecular Weight (calculated)

36103.1 Da

IEP (calculated)

5.385

GRAVY (calculated)

-0.111

Length

327 amino acids

Sequence
(BLAST)

001: MEGEKGRVCV TGGTGFIASW LVMKLLQHGY SVNATIRSHP QSKKDVSYLT NLPGASEKLR IYNADLSDPS SFEAAIEGCI GVFHVAHPID FEDTEPEETV
101: TKRSVEGTLG ILKACLNSKT VKRVVYTSST SAVEYNDKGG DIKDESSWSD VDFLKALNYW GLSYMISKTM TERAALDFAH EHGLDLVTVI PSFVVGPFIC
201: PRFPGSVNAA LALVLGDQQH YHFLMSVSMV HVDDVCSAHI FLLEYPDAKG RYICSSDRLT LNEMSEFLSA KYPQLPIPTI DSLKEVQGYG TPGVSSKKLL
301: DTGFKYKYGL DEMFDEAIQC CKEKGFL

Best Arabidopsis Sequence Match ( AT2G45400.1 )
(BLAST)

001: MVREEQEEDD NNNNNNGGGE RKLLVADETV PSLLDETGLV CVTGGSGFVA SWLIMRLLQR GYSVRATVRT NSEGNKKDIS YLTELPFASE RLQIFTADLN
101: EPESFKPAIE GCKAVFHVAH PMDPNSNETE ETVTKRTVQG LMGILKSCLD AKTVKRFFYT SSAVTVFYSG GNGGGGGEVD ESVWSDVEVF RNQKEKRVSS
201: SYVVSKMAAE TAALEFGGKN GLEVVTLVIP LVVGPFISSS LPSSVFISLA MLFGNYKEKY LFDTYNMVHI DDVARAMIFL LEKPVAKGRY ICSSVEMKID
301: EVFEFLSTKF PQFQLPSIDL NKYKVEKRMG LSSKKLKSAG FEFKYGAEEI FSGAIRSCQA RGFL

Arabidopsis Description

BEN1Protein BRI1-5 ENHANCED 1 [Source:UniProtKB/Swiss-Prot;Acc:O22133]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.