Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400068748 | Potato | cytoskeleton, cytosol, peroxisome | 67.33 | 55.41 |
| Solyc05g051020.2.1 | Tomato | cytosol, plastid | 15.14 | 32.2 |
| KRH27495 | Soybean | mitochondrion | 42.23 | 32.02 |
| VIT_15s0048g00980.t01 | Wine grape | golgi, peroxisome, plastid | 41.43 | 31.8 |
| KRH20841 | Soybean | cytosol | 41.04 | 31.69 |
| VIT_15s0048g01000.t01 | Wine grape | cytosol, peroxisome, plastid | 40.64 | 31.0 |
| Solyc01g094070.2.1 | Tomato | cytosol | 39.84 | 30.86 |
| VIT_15s0048g00990.t01 | Wine grape | cytosol, golgi, peroxisome | 39.84 | 30.58 |
| KRH40604 | Soybean | peroxisome | 39.04 | 30.06 |
| KRH27494 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 39.04 | 29.97 |
| KRH40606 | Soybean | cytosol | 37.45 | 28.75 |
| KRH00562 | Soybean | cytosol | 37.05 | 28.44 |
| VIT_15s0048g01010.t01 | Wine grape | extracellular | 37.85 | 28.36 |
| CDY37037 | Canola | mitochondrion | 35.06 | 28.21 |
| KRH40605 | Soybean | cytosol | 36.65 | 28.13 |
| Bra004907.1-P | Field mustard | cytosol | 33.86 | 27.24 |
| Solyc05g051010.2.1 | Tomato | cytosol, endoplasmic reticulum | 17.13 | 26.22 |
| CDY57107 | Canola | cytosol, peroxisome, plastid | 36.26 | 25.42 |
| Bra040313.1-P | Field mustard | cytosol, golgi, plastid | 35.46 | 24.86 |
| KRH00563 | Soybean | cytosol | 36.26 | 24.46 |
| CDY72000 | Canola | cytosol | 34.26 | 24.43 |
| Solyc03g031470.2.1 | Tomato | golgi | 32.27 | 24.25 |
| KRH27492 | Soybean | cytosol, plastid | 30.28 | 24.2 |
| CDX74737 | Canola | cytosol | 33.86 | 24.15 |
| AT2G45400.1 | Thale cress | cytosol | 34.66 | 23.9 |
| Solyc12g005350.1.1 | Tomato | cytosol | 27.49 | 20.23 |
| Solyc04g071740.1.1 | Tomato | extracellular | 9.96 | 19.84 |
| Solyc10g009540.1.1 | Tomato | cytosol | 20.72 | 19.62 |
| Solyc10g009520.2.1 | Tomato | mitochondrion | 16.33 | 18.3 |
| Solyc02g085020.2.1 | Tomato | cytosol | 27.09 | 17.94 |
| Solyc10g009500.2.1 | Tomato | cytosol | 10.36 | 13.98 |
| Solyc10g009510.1.1 | Tomato | cytosol | 5.18 | 13.54 |
| Solyc04g015590.2.1 | Tomato | cytosol | 7.97 | 11.3 |
Protein Annotations
| EnsemblPlants:Solyc10g018140.1.1 | EnsemblPlantsGene:Solyc10g018140.1 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003854 |
| GO:GO:0006629 | GO:GO:0006694 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016616 |
| GO:GO:0055114 | InterPro:3Beta_OHSteriod_DH/Estase | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF563 | PFAM:PF01073 |
| SUPFAM:SSF51735 | UniParc:UPI000276C772 | UniProt:K4CYT8 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr10:-:6769187..6769942
Molecular Weight (calculated)
28540.1 Da
IEP (calculated)
5.783
GRAVY (calculated)
0.046
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MLIYTNHKVS MHQIEGCIGV FDVAHPIDFE DKETEERITQ RSINGTIGIL QAYLDSKTVK HVVYTCSAST VVGTGSSNVI IDECSWIDVD VMRTLKPFAS
101: CYAISKTLTE KASLGFAEKN GIDLVTVIPT WIHGTFCYSS NSWLCSFIDE NDSCYVLKYH NFSFSQRIYI IYMFYLIVIK NFCAGHQNFS MSYPPIVPFV
201: HVDDVTNAHI FLFENPNAKG RYTCSAVEIT GEKLTEFLLT RYSEFQKQIT E
101: CYAISKTLTE KASLGFAEKN GIDLVTVIPT WIHGTFCYSS NSWLCSFIDE NDSCYVLKYH NFSFSQRIYI IYMFYLIVIK NFCAGHQNFS MSYPPIVPFV
201: HVDDVTNAHI FLFENPNAKG RYTCSAVEIT GEKLTEFLLT RYSEFQKQIT E
001: MKLIIHKFVY FMHITEGNKK DISYLTELPF ASERLQIFTA DLNEPESFKP AIEGCKAVFH VAHPMDPNSN ETEETVTKRT VQGLMGILKS CLDAKTVKRF
101: FYTSSAVTVF YSGGNGGGGG EVDESVWSDV EVFRNQKEKR VSSSYVVSKM AAETAALEFG GKNGLEVVTL VIPLVVGPFI SSSLPSSVFI SLAMLFGNYK
201: EKYLFDTYNM VHIDDVARAM IFLLEKPVAK GRYICSSVEM KIDEVFEFLS TKFPQFQLPS IDLNKYKVEK RMGLSSKKLK SAGFEFKYGA EEIFSGAIRS
301: CQARGFL
101: FYTSSAVTVF YSGGNGGGGG EVDESVWSDV EVFRNQKEKR VSSSYVVSKM AAETAALEFG GKNGLEVVTL VIPLVVGPFI SSSLPSSVFI SLAMLFGNYK
201: EKYLFDTYNM VHIDDVARAM IFLLEKPVAK GRYICSSVEM KIDEVFEFLS TKFPQFQLPS IDLNKYKVEK RMGLSSKKLK SAGFEFKYGA EEIFSGAIRS
301: CQARGFL
Arabidopsis Description
BEN1Protein BRI1-5 ENHANCED 1 [Source:UniProtKB/Swiss-Prot;Acc:O22133]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.