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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 1
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc04g015590.2.1 Tomato cytosol 57.53 60.45
KRH30756 Soybean plastid 39.78 55.22
PGSC0003DMT400051197 Potato cytosol 86.56 47.92
Solyc10g009540.1.1 Tomato cytosol 65.05 45.66
Os06t0651000-01 Rice cytosol 45.7 42.93
Solyc05g051010.2.1 Tomato cytosol, endoplasmic reticulum 34.41 39.02
Os07t0601900-01 Rice plastid 46.24 38.39
Solyc04g071740.1.1 Tomato extracellular 25.81 38.1
VIT_15s0046g01160.t01 Wine grape mitochondrion 61.29 33.63
VIT_15s0046g01150.t01 Wine grape cytosol 42.47 32.51
KRG97147 Soybean cytosol, nucleus 58.6 32.06
VIT_15s0046g01170.t01 Wine grape cytosol 59.14 31.52
KRH68896 Soybean cytosol 56.99 30.81
TraesCS2A01G177500.1 Wheat mitochondrion 54.3 30.15
TraesCS2D01G185400.2 Wheat mitochondrion 54.84 30.09
TraesCS2B01G204500.1 Wheat mitochondrion 54.3 29.97
TraesCS2D01G185600.1 Wheat mitochondrion 53.76 29.85
HORVU2Hr1G033520.1 Barley mitochondrion 53.23 29.64
TraesCS2A01G177200.1 Wheat mitochondrion 53.76 29.5
KRG97148 Soybean cytosol 54.3 29.36
TraesCS2A01G177400.1 Wheat mitochondrion 51.61 28.49
OQU90211 Sorghum cytosol 52.15 28.45
Zm00001d022060_P001 Maize mitochondrion 53.23 28.21
HORVU4Hr1G089470.2 Barley endoplasmic reticulum, mitochondrion, peroxisome 52.15 28.2
TraesCS2B01G200700.1 Wheat endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole 52.15 28.12
HORVU2Hr1G033610.7 Barley mitochondrion 51.61 28.07
TraesCS2A01G174100.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole 52.15 27.87
TraesCS2B01G204600.1 Wheat golgi 53.76 27.7
EER88741 Sorghum peroxisome 52.15 27.32
Os07t0598000-02 Rice cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 50.0 27.27
Os07t0601100-01 Rice mitochondrion 48.92 27.16
TraesCS2D01G181300.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole 50.0 26.96
Os07t0602000-01 Rice mitochondrion, peroxisome, plastid 48.92 26.76
EES14013 Sorghum cytosol 51.08 26.76
Zm00001d031802_P001 Maize plastid 54.3 26.58
Os06t0651100-01 Rice cytosol 50.0 25.98
Os07t0601000-01 Rice golgi 46.77 25.74
TraesCS7A01G505200.1 Wheat peroxisome 48.39 25.0
KXG36638 Sorghum mitochondrion 53.23 25.0
OQU76794 Sorghum cytosol, peroxisome, plastid 41.94 24.84
Zm00001d046811_P001 Maize plastid 47.85 24.65
TraesCS7D01G152300.1 Wheat cytosol, peroxisome, plastid 46.24 24.29
Solyc10g009520.2.1 Tomato mitochondrion 29.03 24.11
TraesCS7B01G412700.1 Wheat plastid 48.92 23.33
TraesCS5A01G554500.1 Wheat endoplasmic reticulum 33.33 23.22
TraesCS7D01G492800.1 Wheat mitochondrion, plastid 48.92 23.21
TraesCS7D01G493000.1 Wheat mitochondrion, plastid 48.92 23.21
HORVU7Hr1G113350.5 Barley plastid 47.31 22.98
Os07t0602050-00 Rice cytosol 37.1 19.88
Solyc02g085020.2.1 Tomato cytosol 38.17 18.73
Solyc12g005350.1.1 Tomato cytosol 32.8 17.89
HORVU2Hr1G033540.4 Barley mitochondrion 30.65 17.38
Solyc03g031470.2.1 Tomato golgi 31.18 17.37
Solyc01g094070.2.1 Tomato cytosol 30.11 17.28
TraesCS7A01G505300.1 Wheat cytosol 22.04 15.41
HORVU7Hr1G030830.1 Barley cytosol 11.83 11.7
Solyc10g018140.1.1 Tomato cytosol 13.98 10.36
Solyc10g009510.1.1 Tomato cytosol 0.54 1.04
GSMUA_AchrUn_... Banana cytosol 0.54 0.81
Solyc05g051020.2.1 Tomato cytosol, plastid 0.0 0.0
Protein Annotations
EnsemblPlants:Solyc10g009500.2.1EnsemblPlantsGene:Solyc10g009500.2Gene3D:3.40.50.720GO:GO:0003674GO:GO:0003824GO:GO:0003854
GO:GO:0006629GO:GO:0006694GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0016616
GO:GO:0055114InterPro:3Beta_OHSteriod_DH/EstaseInterPro:NAD(P)-bd_dom_sfPANTHER:PTHR10366PANTHER:PTHR10366:SF458PFAM:PF01073
SUPFAM:SSF51735UniParc:UPI000276BF90UniProt:K4CYC6MapMan:35.1::
Description
No Description!
Coordinates
chr10:+:3651508..3653974
Molecular Weight (calculated)
20715.1 Da
IEP (calculated)
7.241
GRAVY (calculated)
-0.060
Length
186 amino acids
Sequence
(BLAST)
001: MEEKSTCKVC VTGGAGYIGS SLVQKLLDKG YIVHATLRNL EDESKVGLLK SLSGADKRLK LFKADIYKAE EFEEAIQGCE FVFHVATPLL HSQGSQYKDR
101: TEATVDGVKK IGMICLKSGT VKRLIYTASI VAASPLKEDA ITYKELIDET CWTPLNFSNP YTKQWLWVET LTYLISQQVV LCSCQC
Best Arabidopsis Sequence Match ( AT1G09510.1 )
(BLAST)
001: MADGGKMVCV TGASGYVASW IVKLLLLRGY TVRATVRDPS DEKKTEHLLA LDGAKEKLKL FKADLLEEGS FEQAIEGCDA VFHTASPVSL TVTDPQIELI
101: DPAVKGTLNV LKTCAKVSSV KRVIVTSSMA AVLFREPTLG PNDLVDESCF SDPNFCTEKK LWYALSKTLA EDEAWRFAKE KGLDLVVINP GLVLGPLLKP
201: SLTFSVNVIV ELITGKDNFI NKDFRLVDVR DVALAHIKAF ETPSANGRYI IEGPVVTIND IEKILREFFP DLNLGNKGEA SEIIPVIYKL CVEKVKSLGI
301: EFTPTEATLR DTILSLKEKC LV
Arabidopsis Description
At1g09510 [Source:UniProtKB/TrEMBL;Acc:Q5PP57]
SUBAcon: [plastid,vacuole,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.