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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • nucleus 2
  • plastid 3
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400018059 Potato cytosol 94.92 33.84
Solyc10g009510.1.1 Tomato cytosol 25.42 31.25
VIT_15s0048g00990.t01 Wine grape cytosol, golgi, peroxisome 55.93 20.18
VIT_15s0048g00980.t01 Wine grape golgi, peroxisome, plastid 55.93 20.18
Solyc01g094070.2.1 Tomato cytosol 55.08 20.06
VIT_15s0048g01010.t01 Wine grape extracellular 55.93 19.7
KRH20841 Soybean cytosol 51.69 18.77
KRH00562 Soybean cytosol 51.69 18.65
VIT_15s0048g01000.t01 Wine grape cytosol, peroxisome, plastid 51.69 18.54
KRH27495 Soybean mitochondrion 51.69 18.43
CDY37037 Canola mitochondrion 48.31 18.27
Bra004907.1-P Field mustard cytosol 48.31 18.27
KRH40606 Soybean cytosol 50.0 18.04
KRH40604 Soybean peroxisome 49.15 17.79
KRH27494 Soybean cytosol, endoplasmic reticulum, peroxisome 46.61 16.82
KRH40605 Soybean cytosol 44.92 16.21
CDY72000 Canola cytosol 48.31 16.19
CDX74737 Canola cytosol 48.31 16.19
CDY57107 Canola cytosol, peroxisome, plastid 48.31 15.92
Bra040313.1-P Field mustard cytosol, golgi, plastid 48.31 15.92
AT2G45400.1 Thale cress cytosol 48.31 15.66
KRH27492 Soybean cytosol, plastid 41.53 15.61
Solyc10g009520.2.1 Tomato mitochondrion 28.81 15.18
Solyc10g018140.1.1 Tomato cytosol 32.2 15.14
KRH00563 Soybean cytosol 45.76 14.52
Solyc03g031470.2.1 Tomato golgi 40.68 14.37
Solyc02g085020.2.1 Tomato cytosol 35.59 11.08
Solyc12g005350.1.1 Tomato cytosol 29.66 10.26
Solyc10g009540.1.1 Tomato cytosol 15.25 6.79
Solyc05g051010.2.1 Tomato cytosol, endoplasmic reticulum 3.39 2.44
Solyc04g071740.1.1 Tomato extracellular 1.69 1.59
Solyc04g015590.2.1 Tomato cytosol 0.85 0.56
Solyc10g009500.2.1 Tomato cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:Solyc05g051020.2.1EnsemblPlantsGene:Solyc05g051020.2Gene3D:3.40.50.720InterPro:NAD(P)-bd_dom_sfPANTHER:PTHR10366PANTHER:PTHR10366:SF563
SUPFAM:SSF51735UniParc:UPI0002767425UniProt:K4C1D4MapMan:35.1::
Description
No Description!
Coordinates
chr5:+:61217641..61218617
Molecular Weight (calculated)
13315.1 Da
IEP (calculated)
6.247
GRAVY (calculated)
-0.284
Length
118 amino acids
Sequence
(BLAST)
001: MAMMYGNQEN SMKYPSLTPF VHVDDVANAH ILLLENSKAK GRYICSAVEV TPDELFDFLS ARYPEYRIPN VDSLREVGGI KHPSLSSKKL LDSGFKYKYG
101: LEEMFDGAIE CCKQKGLL
Best Arabidopsis Sequence Match ( AT2G45400.3 )
(BLAST)
001: MKLIIHKFVY FMHITEGNKK DISYLTELPF ASERLQIFTA DLNEPESFKP AIEGCKAVFH VAHPMDPNSN ETEETVTKRT VQGLMGILKS CLDAKTVKRF
101: FYTSSAVTVF YSGGNGGGGG EVDESVWSDV EVFRNQKEKR VSSSYVVSKM AAETAALEFG GKNGLEVVTL VIPLVVGPFI SSSLPSSVFI SLAMLFGNYK
201: EKYLFDTYNM VHIDDVARAM IFLLEKPVAK GRYICSSVEM KIDEVFEFLS TKFPQFQLPS IDLNKYKVEK RMGLSSKKLK SAGFEFKYGA EEIFSGAIRS
301: CQARGFL
Arabidopsis Description
BEN1Protein BRI1-5 ENHANCED 1 [Source:UniProtKB/Swiss-Prot;Acc:O22133]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.