CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
peroxisome 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37037	Canola	mitochondrion	84.36	96.79
CDX74737	Canola	cytosol	88.83	90.34
CDY72000	Canola	cytosol	88.27	89.77
AT2G45400.1	Thale cress	cytosol	88.27	86.81
VIT_15s0048g01000.t01	Wine grape	cytosol, peroxisome, plastid	50.84	55.32
Solyc05g051010.2.1	Tomato	cytosol, endoplasmic reticulum	24.86	54.27
VIT_15s0048g01010.t01	Wine grape	extracellular	50.56	54.03
KRH40606	Soybean	cytosol	48.88	53.52
VIT_15s0048g00980.t01	Wine grape	golgi, peroxisome, plastid	48.6	53.21
KRH00562	Soybean	cytosol	48.04	52.6
KRH20841	Soybean	cytosol	47.49	52.31
VIT_15s0048g00990.t01	Wine grape	cytosol, golgi, peroxisome	47.77	52.29
KRH40605	Soybean	cytosol	47.77	52.29
KRH40604	Soybean	peroxisome	47.21	51.84
KRH27495	Soybean	mitochondrion	47.77	51.66
KRH27494	Soybean	cytosol, endoplasmic reticulum, peroxisome	46.65	51.07
PGSC0003DMT400018059	Potato	cytosol	46.09	49.85
Solyc05g051020.2.1	Tomato	cytosol, plastid	15.92	48.31
Solyc01g094070.2.1	Tomato	cytosol	43.02	47.53
KRH00563	Soybean	cytosol	48.6	46.77
PGSC0003DMT400060967	Potato	cytosol	36.31	43.48
PGSC0003DMT400087830	Potato	cytosol	23.18	42.35
PGSC0003DMT400068748	Potato	cytoskeleton, cytosol, peroxisome	33.8	39.67
KRH27492	Soybean	cytosol, plastid	32.96	37.58
CDY25313	Canola	cytosol	35.2	37.28
CDY07276	Canola	cytosol	35.47	37.13
CDY52321	Canola	cytosol	34.92	36.98
Solyc10g018140.1.1	Tomato	cytosol	25.42	36.26
CDY32381	Canola	cytosol	34.92	36.23
CDY52372	Canola	cytosol	37.99	35.32
CDX95155	Canola	cytosol	37.99	35.32
CDY21246	Canola	cytosol	23.46	34.43
CDX92822	Canola	cytosol	31.01	31.27
CDY46656	Canola	cytosol	30.73	30.99
CDY08270	Canola	cytosol	18.44	29.6
CDX89264	Canola	mitochondrion	22.07	24.92

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	GO:A0A078J1T5	UniProt:A0A078J1T5	EnsemblPlants:CDY57107	ProteinID:CDY57107
ProteinID:CDY57107.1	InterPro:Epimerase_deHydtase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0050662	EnsemblPlantsGene:GSBRNA2T00020557001	InterPro:NAD(P)-bd_dom_sf	PFAM:PF01370
PANTHER:PTHR10366	PANTHER:PTHR10366:SF560	SUPFAM:SSF51735	TMHMM:TMhelix	UniParc:UPI0004EDF859	SEG:seg

Description

BnaC04g56940DBnaC04g56940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J1T5]

Coordinates

chrLK033547:-:32763..35219

Molecular Weight (calculated)

39526.5 Da

IEP (calculated)

7.405

GRAVY (calculated)

-0.095

Length

358 amino acids

Sequence
(BLAST)

001: MGREEDDNKN GDGERKLGDE TPSSFLDGTG LVCVTGGTGF IASWLIMRLL QRGYSVRATV RTNPEGSKKD ISYLTELPFA SERLKIFTAD LNEPDSFKPA
101: IEGCKAVFHV AHPMDPTSNE TEETVTKRTV QGLMGILKSC LDAKTVKRFF YTSSAVTVFY GVGTGAGGNG GVVDESVWSD VEVFRNQKEK RVSSSYVVSK
201: MAAETAALEF GVKNGLEVVT LVIPLVVGPF ISQSLPSSVF ISLAMIFGNF KEKYLFDTYN MVHIDDVARA MIFLLEKPIA KGRYICSSVE MKIDEVFEFL
301: STRFPQFQLP SVDLKSYRVE KRMSLSSKKL RTAGFEFKHG ADDIFTGAIK SCQARGFL

Best Arabidopsis Sequence Match ( AT2G45400.1 )
(BLAST)

001: MVREEQEEDD NNNNNNGGGE RKLLVADETV PSLLDETGLV CVTGGSGFVA SWLIMRLLQR GYSVRATVRT NSEGNKKDIS YLTELPFASE RLQIFTADLN
101: EPESFKPAIE GCKAVFHVAH PMDPNSNETE ETVTKRTVQG LMGILKSCLD AKTVKRFFYT SSAVTVFYSG GNGGGGGEVD ESVWSDVEVF RNQKEKRVSS
201: SYVVSKMAAE TAALEFGGKN GLEVVTLVIP LVVGPFISSS LPSSVFISLA MLFGNYKEKY LFDTYNMVHI DDVARAMIFL LEKPVAKGRY ICSSVEMKID
301: EVFEFLSTKF PQFQLPSIDL NKYKVEKRMG LSSKKLKSAG FEFKYGAEEI FSGAIRSCQA RGFL

Arabidopsis Description

BEN1Protein BRI1-5 ENHANCED 1 [Source:UniProtKB/Swiss-Prot;Acc:O22133]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.