CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019062.1-P	Field mustard	cytosol	99.15	99.44
CDX92822	Canola	cytosol	92.39	92.39
AT4G27250.1	Thale cress	cytosol	83.38	83.62
CDX89264	Canola	mitochondrion	66.76	74.76
KRH27122	Soybean	cytosol	57.75	57.1
KRH22215	Soybean	cytosol	27.89	56.25
PGSC0003DMT400056128	Potato	cytosol	45.35	55.9
Solyc12g005350.1.1	Tomato	cytosol	52.11	54.25
VIT_19s0014g04980.t01	Wine grape	golgi, plasma membrane, plastid	59.72	52.74
KRH55603	Soybean	mitochondrion	56.06	52.51
KRH25898	Soybean	cytosol, extracellular	43.66	52.01
GSMUA_Achr5P00800_001	Banana	mitochondrion	50.99	48.4
HORVU7Hr1G101860.2	Barley	cytosol	41.41	44.14
TraesCS7A01G450700.1	Wheat	cytosol, plastid	43.66	43.66
TraesCS7D01G440000.1	Wheat	cytosol	42.82	42.94
TraesCS7B01G350500.1	Wheat	cytosol	42.54	42.78
Os06t0683100-01	Rice	cytosol	43.1	41.69
Zm00001d014481_P001	Maize	cytosol	43.1	40.26
OQU76902	Sorghum	cytosol	43.1	39.33
CDY25313	Canola	cytosol	34.08	35.8
CDY21246	Canola	cytosol	24.51	35.66
CDY52321	Canola	cytosol	33.52	35.21
CDY07276	Canola	cytosol	32.96	34.21
CDY32381	Canola	cytosol	32.96	33.91
CDY52372	Canola	cytosol	36.34	33.51
CDX95155	Canola	cytosol	36.34	33.51
CDY72000	Canola	cytosol	31.55	31.82
CDX74737	Canola	cytosol	31.55	31.82
CDY37037	Canola	mitochondrion	27.61	31.41
CDY57107	Canola	cytosol, peroxisome, plastid	30.99	30.73
CDY08270	Canola	cytosol	18.03	28.7

Protein Annotations

EnsemblPlants:CDY46656	EnsemblPlantsGene:GSBRNA2T00085950001	Gene3D:3.40.50.720	GO:A0A078I9Y0	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF350
PFAM:PF01370	ProteinID:CDY46656	ProteinID:CDY46656.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI0004EDCAFA
UniProt:A0A078I9Y0	MapMan:35.1	:	:	:	:

Description

BnaA03g48520DBnaA03g48520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I9Y0]

Coordinates

chrLK032681:+:18402..20341

Molecular Weight (calculated)

39863.9 Da

IEP (calculated)

6.423

GRAVY (calculated)

-0.193

Length

355 amino acids

Sequence
(BLAST)

001: MELNGEEGKA TTYCVTGASG YIGSWLVKSL LERGYTVHAT LRDLAKSQYF QSKWRGNERL RIFRSDLQDG GSFDDAVKGC DGVFHVAASM EFDISPDQVN
101: LESYVQSKVI DPAIKGVRNV LGSCLKSNSV KRVVFTSSIS TLTAKDENER WRSIVDETCK TPIDHVLKTK ASGWVYVLSK LVSEEEAFRY AKESGMDLVS
201: VITTTVSGPF CTPSLPSSLQ VLLSPITGES KLFGILSAVN KRMGSIGLVH IEDICMAHLF LMEEPKAEGQ YICCVDNIDM HELMLNHFSK EYLCKVHKLD
301: DDLEERQSLM KPMISSKKLK DLGFEYKYSI DEIIRQTIDA SISFRFPTLD HKLKY

Best Arabidopsis Sequence Match ( AT4G27250.1 )
(BLAST)

001: MELQGEESKT ATYCVTGASG YIGSWLVKSL LQRGYTVHAT LRDLAKSEYF QSKWKENERL RLFRADLRDD GSFDDAVKGC DGVFHVAASM EFDISSDHVN
101: LESYVQSKVI EPALKGVRNV LSSCLKSKSV KRVVFTSSIS TLTAKDENER MRSFVDETCK AHVDHVLKTQ ASGWIYVLSK LVSEEEAFRY AKERGMDLVS
201: VITTTVSGPF LTPFVPSSVQ VLLSPITGDS KLFAILSAVN KRMGSIALVH IEDICRAHLF LMEQPKAKGQ YICCVDNIDM HELMLHHFSK DYLCKVQKVN
301: EDEEERECMK PIISSKKLRE LGFEYKYGIE EIVDQTIDAS IKIKFPTLNH KLRQ

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8H1R1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.