Factsheet for PGSC0003DMT400056128

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
golgi 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g005350.1.1	Tomato	cytosol	89.58	75.66
KRH22215	Soybean	cytosol	35.76	58.52
KRH25898	Soybean	cytosol, extracellular	52.78	51.01
KRH27122	Soybean	cytosol	60.76	48.75
VIT_19s0014g04980.t01	Wine grape	golgi, plasma membrane, plastid	65.28	46.77
CDX92822	Canola	cytosol	56.94	46.2
AT4G27250.1	Thale cress	cytosol	56.25	45.76
Bra019062.1-P	Field mustard	cytosol	55.9	45.48
CDY46656	Canola	cytosol	55.9	45.35
KRH55603	Soybean	mitochondrion	59.38	45.12
GSMUA_Achr5P00800_001	Banana	mitochondrion	55.21	42.51
CDX89264	Canola	mitochondrion	44.1	40.06
TraesCS7B01G350500.1	Wheat	cytosol	46.88	38.24
Os06t0683100-01	Rice	cytosol	48.26	37.87
TraesCS7D01G440000.1	Wheat	cytosol	46.53	37.85
TraesCS7A01G450700.1	Wheat	cytosol, plastid	46.18	37.46
HORVU7Hr1G101860.2	Barley	cytosol	42.36	36.64
Zm00001d014481_P001	Maize	cytosol	47.92	36.32
OQU76902	Sorghum	cytosol	48.26	35.73
PGSC0003DMT400013000	Potato	extracellular	38.54	32.84
PGSC0003DMT400087830	Potato	cytosol	21.53	31.63
PGSC0003DMT400018059	Potato	cytosol	35.07	30.51
PGSC0003DMT400068748	Potato	cytoskeleton, cytosol, peroxisome	31.25	29.51
PGSC0003DMT400009287	Potato	cytosol	36.81	27.75
PGSC0003DMT400060967	Potato	cytosol	26.74	25.75
PGSC0003DMT400051197	Potato	cytosol	27.08	23.21
PGSC0003DMT400051196	Potato	cytosol	22.22	20.98

Protein Annotations

EnsemblPlants:PGSC0003DMT400056128	EnsemblPlantsGene:PGSC0003DMG400021805	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF350	PFAM:PF01370
PGSC:PGSC0003DMG400021805	SUPFAM:SSF51735	UniParc:UPI00029543A4	UniProt:M1BZ03	MapMan:35.1	:

Description

Cinnamoyl-CoA reductase [Source:PGSC_GENE;Acc:PGSC0003DMG400021805]

Coordinates

chr12:+:8160358..8162761

Molecular Weight (calculated)

32059.8 Da

IEP (calculated)

7.178

GRAVY (calculated)

-0.001

Length

288 amino acids

Sequence
(BLAST)

001: MLRLFKADLR KEGSFDEAMR GCIGLFHVAA PMEFCPQATE NVDSYVEENM IEPAIQGTLN VLKSCLKSNS VKKVVFTSSI STITARDNFG KWRPFVDESC
101: KIPIQHVKNT KPSGWVYVLL KVLTEDAAFQ FAKENGIDLV STITPTIAGP FLTPTVPSSI RVLLSPITGD PEVSAILTAV NRRMGSIALA HIEDICGAHI
201: FLMENIKAEG RYICCARSWA MSEVIDHLKK EYPYPAIERQ DHDSVIPSEI SSKKLRALGF SFKYEINDIV RDTISSCIHH GFFASIQK

Best Arabidopsis Sequence Match ( AT4G27250.1 )
(BLAST)

001: MELQGEESKT ATYCVTGASG YIGSWLVKSL LQRGYTVHAT LRDLAKSEYF QSKWKENERL RLFRADLRDD GSFDDAVKGC DGVFHVAASM EFDISSDHVN
101: LESYVQSKVI EPALKGVRNV LSSCLKSKSV KRVVFTSSIS TLTAKDENER MRSFVDETCK AHVDHVLKTQ ASGWIYVLSK LVSEEEAFRY AKERGMDLVS
201: VITTTVSGPF LTPFVPSSVQ VLLSPITGDS KLFAILSAVN KRMGSIALVH IEDICRAHLF LMEQPKAKGQ YICCVDNIDM HELMLHHFSK DYLCKVQKVN
301: EDEEERECMK PIISSKKLRE LGFEYKYGIE EIVDQTIDAS IKIKFPTLNH KLRQ

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8H1R1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.