CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH25898	Soybean	cytosol, extracellular	65.96	83.89
KRH27122	Soybean	cytosol	73.35	77.44
KRH22215	Soybean	cytosol	34.04	73.3
VIT_19s0014g04980.t01	Wine grape	golgi, plasma membrane, plastid	63.59	59.95
PGSC0003DMT400056128	Potato	cytosol	45.12	59.38
Solyc12g005350.1.1	Tomato	cytosol	51.98	57.77
CDY46656	Canola	cytosol	52.51	56.06
Bra019062.1-P	Field mustard	cytosol	51.98	55.65
CDX92822	Canola	cytosol	51.98	55.49
AT4G27250.1	Thale cress	cytosol	51.72	55.37
GSMUA_Achr5P00800_001	Banana	mitochondrion	49.08	49.73
CDX89264	Canola	mitochondrion	39.31	47.0
Os06t0683100-01	Rice	cytosol	44.85	46.32
TraesCS7D01G440000.1	Wheat	cytosol	43.01	46.05
HORVU7Hr1G101860.2	Barley	cytosol	40.37	45.95
TraesCS7B01G350500.1	Wheat	cytosol	42.48	45.61
TraesCS7A01G450700.1	Wheat	cytosol, plastid	42.22	45.07
Zm00001d014481_P001	Maize	cytosol	44.59	44.47
OQU76902	Sorghum	cytosol	43.01	41.9
KRH71611	Soybean	nucleus	35.62	39.82
KRH20841	Soybean	cytosol	33.51	39.08
KRH15169	Soybean	plastid	35.36	38.51
KRH27495	Soybean	mitochondrion	32.72	37.46
KRH05848	Soybean	plastid	34.83	37.29
KRH27494	Soybean	cytosol, endoplasmic reticulum, peroxisome	31.93	37.0
KRH41990	Soybean	cytosol, extracellular	32.72	36.8
KRH40606	Soybean	cytosol	31.4	36.39
KRH41993	Soybean	golgi	32.45	36.39
KRH40604	Soybean	peroxisome	31.13	36.2
KRH00562	Soybean	cytosol	30.61	35.47
KRH40605	Soybean	cytosol	30.34	35.17
KRH05851	Soybean	extracellular	10.82	33.06
KRH00563	Soybean	cytosol	30.61	31.18
KRH30756	Soybean	plastid	10.82	30.6
KRH68896	Soybean	cytosol	26.65	29.36
KRG97147	Soybean	cytosol, nucleus	25.86	28.82
KRG97148	Soybean	cytosol	26.12	28.78
KRH27492	Soybean	cytosol, plastid	23.48	28.34

Protein Annotations

EMBL:ACUP02004028	EnsemblPlants:KRH55603	EnsemblPlantsGene:GLYMA_06G265700	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF350
PFAM:PF01370	ProteinID:KRH55603	ProteinID:KRH55603.1	SUPFAM:SSF51735	UniParc:UPI0002339FEF	UniProt:A0A0R0JTU3
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:45375395..45380892

Molecular Weight (calculated)

41818.5 Da

IEP (calculated)

7.223

GRAVY (calculated)

0.052

Length

379 amino acids

Sequence
(BLAST)

001: MLNLRLFYKG LHQVGLVCKI LAVKKGMQEV LKMVKSNEQV VPGAKYCVTG STGYIGSWLV EALLERGCTV HATVRDPAKS LHLLSLWKGG DQLRFFQADL
101: HEEGSFDEAV KGCIGVFHVA ASMEFNVRDK ENNEAFVQAN ITDPAIKGTI NLLKSCLKSN SVKRVVFTSS ISTITAKDIN GKWKSIVDES CQIHPDTVWN
201: TQASGWVYAL SKLLTEEAAF QFAKENGIDL VSVISSTVAG PFFTANVPTS VKVLVSPLTG ETEYFRILSA VNARMGSIAL VHIEDICSAH IFLMEHAKAE
301: GRYICSSQSC ALSDLATLIS KVYSNSNIYQ KTEKIYDKVP SEISSKKLQD LGFSYKHDLE DIIYQTLMCC LDYGYLPPV

Best Arabidopsis Sequence Match ( AT4G27250.1 )
(BLAST)

001: MELQGEESKT ATYCVTGASG YIGSWLVKSL LQRGYTVHAT LRDLAKSEYF QSKWKENERL RLFRADLRDD GSFDDAVKGC DGVFHVAASM EFDISSDHVN
101: LESYVQSKVI EPALKGVRNV LSSCLKSKSV KRVVFTSSIS TLTAKDENER MRSFVDETCK AHVDHVLKTQ ASGWIYVLSK LVSEEEAFRY AKERGMDLVS
201: VITTTVSGPF LTPFVPSSVQ VLLSPITGDS KLFAILSAVN KRMGSIALVH IEDICRAHLF LMEQPKAKGQ YICCVDNIDM HELMLHHFSK DYLCKVQKVN
301: EDEEERECMK PIISSKKLRE LGFEYKYGIE EIVDQTIDAS IKIKFPTLNH KLRQ

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8H1R1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.