CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22215	Soybean	cytosol	39.93	67.61
KRH55603	Soybean	mitochondrion	83.89	65.96
KRH27122	Soybean	cytosol	73.15	60.72
PGSC0003DMT400056128	Potato	cytosol	51.01	52.78
Solyc12g005350.1.1	Tomato	cytosol	52.01	45.45
VIT_19s0014g04980.t01	Wine grape	golgi, plasma membrane, plastid	60.74	45.02
AT4G27250.1	Thale cress	cytosol	52.35	44.07
CDX92822	Canola	cytosol	52.01	43.66
CDY46656	Canola	cytosol	52.01	43.66
Bra019062.1-P	Field mustard	cytosol	51.68	43.5
GSMUA_Achr5P00800_001	Banana	mitochondrion	49.66	39.57
CDX89264	Canola	mitochondrion	39.93	37.54
HORVU7Hr1G101860.2	Barley	cytosol	41.28	36.94
Os06t0683100-01	Rice	cytosol	44.97	36.51
TraesCS7A01G450700.1	Wheat	cytosol, plastid	42.95	36.06
TraesCS7D01G440000.1	Wheat	cytosol	42.62	35.88
TraesCS7B01G350500.1	Wheat	cytosol	42.28	35.69
Zm00001d014481_P001	Maize	cytosol	44.63	35.0
OQU76902	Sorghum	cytosol	43.96	33.68
KRH41993	Soybean	golgi	36.24	31.95
KRH71611	Soybean	nucleus	35.91	31.56
KRH20841	Soybean	cytosol	34.23	31.38
KRH41990	Soybean	cytosol, extracellular	35.23	31.16
KRH27494	Soybean	cytosol, endoplasmic reticulum, peroxisome	33.89	30.89
KRH40604	Soybean	peroxisome	33.56	30.67
KRH27495	Soybean	mitochondrion	33.56	30.21
KRH40606	Soybean	cytosol	32.89	29.97
KRH15169	Soybean	plastid	34.9	29.89
KRH05851	Soybean	extracellular	12.42	29.84
KRH05848	Soybean	plastid	35.23	29.66
KRH00562	Soybean	cytosol	32.21	29.36
KRH40605	Soybean	cytosol	31.54	28.75
KRH00563	Soybean	cytosol	31.88	25.54
KRH27492	Soybean	cytosol, plastid	25.5	24.2
KRG97147	Soybean	cytosol, nucleus	26.17	22.94
KRH68896	Soybean	cytosol	25.5	22.09
KRG97148	Soybean	cytosol	24.5	21.22
KRH30756	Soybean	plastid	6.71	14.93

Protein Annotations

EMBL:ACUP02007377	EnsemblPlants:KRH25898	EnsemblPlantsGene:GLYMA_12G137000	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF350
PFAM:PF01370	ProteinID:KRH25898	ProteinID:KRH25898.1	SUPFAM:SSF51735	UniParc:UPI0006EDF143	UniProt:A0A0R0H5M7
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:-:16284464..16286021

Molecular Weight (calculated)

32974.8 Da

IEP (calculated)

7.025

GRAVY (calculated)

0.072

Length

298 amino acids

Sequence
(BLAST)

001: MFHFLLSKCT SKVIAPSVSL WKGGDQLRFF QADLHEEGSF DEAVKGCVGV FHIAASMELN VSDKENNGTI NLLKSCLKSN SVKRVVFTSS ISTVTAKDIN
101: GKSKHIVDES CQIHPDTCME HTSKWMGLFL WWQVYALSKL LTEEAAFQFA KENGIDLVSV ITSTVAGPFF TANVLTSVKV LLSPLTGETE YFKILSAVNA
201: RMGSIALVHI EDICSAHIFL TEHAKAEGRY KCSSQSCTLS NLATLLSKVK TEKNYDKVPS VISSKKLEDL GFSYKHGLED IIYQTLMCFL DYGYLPPV

Best Arabidopsis Sequence Match ( AT4G27250.1 )
(BLAST)

001: MELQGEESKT ATYCVTGASG YIGSWLVKSL LQRGYTVHAT LRDLAKSEYF QSKWKENERL RLFRADLRDD GSFDDAVKGC DGVFHVAASM EFDISSDHVN
101: LESYVQSKVI EPALKGVRNV LSSCLKSKSV KRVVFTSSIS TLTAKDENER MRSFVDETCK AHVDHVLKTQ ASGWIYVLSK LVSEEEAFRY AKERGMDLVS
201: VITTTVSGPF LTPFVPSSVQ VLLSPITGDS KLFAILSAVN KRMGSIALVH IEDICRAHLF LMEQPKAKGQ YICCVDNIDM HELMLHHFSK DYLCKVQKVN
301: EDEEERECMK PIISSKKLRE LGFEYKYGIE EIVDQTIDAS IKIKFPTLNH KLRQ

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8H1R1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.