Factsheet for VIT_19s0014g04980.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, plastid

Predictor Summary:

plastid 4
mitochondrion 3
plasma membrane 2
golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	golgi
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27122	Soybean	cytosol	61.19	68.52
KRH22215	Soybean	cytosol	28.86	65.91
PGSC0003DMT400056128	Potato	cytosol	46.77	65.28
KRH55603	Soybean	mitochondrion	59.95	63.59
Solyc12g005350.1.1	Tomato	cytosol	52.99	62.46
KRH25898	Soybean	cytosol, extracellular	45.02	60.74
CDY46656	Canola	cytosol	52.74	59.72
Bra019062.1-P	Field mustard	cytosol	52.24	59.32
CDX92822	Canola	cytosol	52.24	59.15
AT4G27250.1	Thale cress	cytosol	51.74	58.76
GSMUA_Achr5P00800_001	Banana	mitochondrion	50.25	54.01
CDX89264	Canola	mitochondrion	38.81	49.21
Os06t0683100-01	Rice	cytosol	43.53	47.68
TraesCS7B01G350500.1	Wheat	cytosol	40.3	45.89
HORVU7Hr1G101860.2	Barley	cytosol	37.56	45.35
Zm00001d014481_P001	Maize	cytosol	42.79	45.26
TraesCS7D01G440000.1	Wheat	cytosol	39.8	45.2
TraesCS7A01G450700.1	Wheat	cytosol, plastid	39.55	44.79
OQU76902	Sorghum	cytosol	43.28	44.73
VIT_15s0048g00980.t01	Wine grape	golgi, peroxisome, plastid	34.33	42.2
VIT_15s0048g00990.t01	Wine grape	cytosol, golgi, peroxisome	33.58	41.28
VIT_15s0048g01010.t01	Wine grape	extracellular	33.83	40.6
VIT_18s0001g12800.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane, plastid	37.31	40.0
VIT_00s0361g00040.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	32.09	38.17
VIT_15s0048g01000.t01	Wine grape	cytosol, peroxisome, plastid	31.09	37.99
VIT_00s0361g00030.t01	Wine grape	cytosol	8.96	36.36
VIT_18s0001g12790.t01	Wine grape	cytosol	12.69	35.92
VIT_04s0023g02090.t01	Wine grape	cytosol	14.18	35.4
VIT_15s0046g01170.t01	Wine grape	cytosol	27.86	32.09
VIT_15s0046g01160.t01	Wine grape	mitochondrion	26.87	31.86
VIT_18s0001g12810.t01	Wine grape	cytosol	32.09	31.46
VIT_18s0001g12820.t01	Wine grape	cytosol	32.34	30.59
VIT_02s0025g01260.t01	Wine grape	plastid	25.87	30.41
VIT_15s0046g01150.t01	Wine grape	cytosol	17.66	29.22

Protein Annotations

EntrezGene:100255535	wikigene:100255535	Gene3D:3.40.50.720	MapMan:35.1	ProteinID:CCB46469	ProteinID:CCB46469.1
InterPro:Epimerase_deHydtase	UniProt:F6H2I9	EMBL:FN595229	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	EntrezGene:LOC100255535	wikigene:LOC100255535	InterPro:NAD(P)-bd_dom_sf	PFAM:PF01370	PANTHER:PTHR10366
PANTHER:PTHR10366:SF350	SUPFAM:SSF51735	TIGR:TC58629	UniParc:UPI00015C7F17	ArrayExpress:VIT_19s0014g04980	EnsemblPlantsGene:VIT_19s0014g04980
EnsemblPlants:VIT_19s0014g04980.t01	unigene:Vvi.12667	RefSeq:XP_002282842	RefSeq:XP_002282842.1	RefSeq:XP_002282842.2	:

Description

No Description!

Coordinates

chr19:+:5318062..5327582

Molecular Weight (calculated)

44880.3 Da

IEP (calculated)

7.835

GRAVY (calculated)

-0.001

Length

402 amino acids

Sequence
(BLAST)

001: MYRPAAVTRR RNPLGAFLLP PSAFFIRFNF PFWRLVFLVA GILQENKGME NGPERKVEGK REEKMRFCVT GATGYIGSWL VNTLLQRGYM VHATLRDPEK
101: AAHLLPSWSS CDRLRLFKAD LLNEGSFDEA VKGCNGVYHV AASMEFNVMA TENIEAYVQS NIIDPAIKGT LNLLKACLKS KTVERVVFTS SISTITAKDS
201: LGRWRAVVDE SCQTPIDHVW KTRVGGWVYV LSKLLTEEAA FQFAKENGID LVSVITTTVG GPFITSSVPS SIRVLLSPIT GEPEFFSILS AVNSRMGSLA
301: LVHIEDICNA HIFLMEQAKA EGRYICGVQS YQMSELINHL AKVYPCSNIQ RLVEEECGSA PSEICSKKLN DLGFNYKYGL EDIIQQTINC CLDHGFLPQI
401: RR

Best Arabidopsis Sequence Match ( AT4G27250.1 )
(BLAST)

001: MELQGEESKT ATYCVTGASG YIGSWLVKSL LQRGYTVHAT LRDLAKSEYF QSKWKENERL RLFRADLRDD GSFDDAVKGC DGVFHVAASM EFDISSDHVN
101: LESYVQSKVI EPALKGVRNV LSSCLKSKSV KRVVFTSSIS TLTAKDENER MRSFVDETCK AHVDHVLKTQ ASGWIYVLSK LVSEEEAFRY AKERGMDLVS
201: VITTTVSGPF LTPFVPSSVQ VLLSPITGDS KLFAILSAVN KRMGSIALVH IEDICRAHLF LMEQPKAKGQ YICCVDNIDM HELMLHHFSK DYLCKVQKVN
301: EDEEERECMK PIISSKKLRE LGFEYKYGIE EIVDQTIDAS IKIKFPTLNH KLRQ

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8H1R1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.