Factsheet for VIT_18s0001g12810.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0001g12820.t01	Wine grape	cytosol	69.02	66.59
VIT_18s0001g12800.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane, plastid	48.29	52.8
Solyc04g071740.1.1	Tomato	extracellular	15.61	50.79
VIT_18s0001g12790.t01	Wine grape	cytosol	16.59	47.89
VIT_15s0048g00980.t01	Wine grape	golgi, peroxisome, plastid	37.32	46.79
VIT_15s0048g00990.t01	Wine grape	cytosol, golgi, peroxisome	37.32	46.79
VIT_15s0048g01010.t01	Wine grape	extracellular	37.07	45.37
VIT_04s0023g02090.t01	Wine grape	cytosol	17.56	44.72
VIT_15s0048g01000.t01	Wine grape	cytosol, peroxisome, plastid	35.37	44.07
VIT_00s0361g00040.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	33.66	40.83
VIT_00s0361g00030.t01	Wine grape	cytosol	8.78	36.36
VIT_02s0025g01260.t01	Wine grape	plastid	27.8	33.33
VIT_19s0014g04980.t01	Wine grape	golgi, plasma membrane, plastid	31.46	32.09
VIT_15s0046g01160.t01	Wine grape	mitochondrion	26.34	31.86
VIT_15s0046g01150.t01	Wine grape	cytosol	18.05	30.45
VIT_15s0046g01170.t01	Wine grape	cytosol	25.12	29.51

Protein Annotations

EntrezGene:100267635	wikigene:100267635	Gene3D:3.40.50.720	MapMan:9.2.2.9.1	ProteinID:CCB45963	ProteinID:CCB45963.1
InterPro:Epimerase_deHydtase	UniProt:F6H061	EMBL:FN595227	GO:GO:0003674	GO:GO:0003824	GO:GO:0003854
GO:GO:0005488	GO:GO:0006629	GO:GO:0006694	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0016616	GO:GO:0050662	GO:GO:0055114	EntrezGene:LOC100267635	wikigene:LOC100267635	InterPro:NAD(P)-bd_dom_sf
PFAM:PF01370	PANTHER:PTHR10366	PANTHER:PTHR10366:SF276	SUPFAM:SSF51735	UniParc:UPI0002109217	ArrayExpress:VIT_18s0001g12810
EnsemblPlantsGene:VIT_18s0001g12810	EnsemblPlants:VIT_18s0001g12810.t01	RefSeq:XP_002281758	RefSeq:XP_002281758.2	SEG:seg	:

Description

No Description!

Coordinates

chr18:-:10917869..10923188

Molecular Weight (calculated)

45910.2 Da

IEP (calculated)

6.349

GRAVY (calculated)

-0.127

Length

410 amino acids

Sequence
(BLAST)

001: MEGGEKGTVC VTGASGFIGS WLVMKLLQRG YYVHATVRDP GNVEKVKHLL ELPKASTHLS LWRADLKEEG SFDDAIQGCI GVFHVASPMD ISTQDAQNEV
101: IDPTVNGVLD IMRACTKAKT VKRFIYTSTT GTITVGPEPL PLEYDESFWT DVDYCKAQKM TAWMYFIAKT TAEKAAWEFA KEKGLDVVTI QPPVVVGPFV
201: TPSLPPSAKL VLAVLTGEEA GCNLLARGRA VHVDDLCDAH IYLFEHPEAK GRYICSSHCF NIIELARSLS LKYSEYNIPT KFEGVDESLK SIPCSSRKLL
301: DLGYKFKYNS EEYDIGDLCS GAIESCKEKG LMPSPGAFLL FPWKFHDYIL CLIGFFRFRS QLLFICYDFE VSGIRLGAKR LEADTTRPNR IGLGQYFEPW
401: PHEKQRSQQF

Best Arabidopsis Sequence Match ( AT5G42800.1 )
(BLAST)

001: MVSQKETVCV TGASGFIGSW LVMRLLERGY FVRATVRDPG NLKKVQHLLD LPNAKTLLTL WKADLSEEGS YDDAINGCDG VFHVATPMDF ESKDPENEVI
101: KPTVNGMLGI MKACVKAKTV RRFVFTSSAG TVNVEEHQKN VYDENDWSDL EFIMSKKMTG WMYFVSKTLA EKAAWDFAEE KGLDFISIIP TLVVGPFITT
201: SMPPSLITAL SPITRNEAHY SIIRQGQYVH LDDLCNAHIF LYEQAAAKGR YICSSHDATI LTISKFLRPK YPEYNVPSTF EGVDENLKSI EFSSKKLTDM
301: GFNFKYSLEE MFIESIETCR QKGFLPVSLS YQSISEIKTK NENIDVKTGD GLTDGMKPCN KTETGITGER TDAPMLAQQM CA

Arabidopsis Description

DFRADihydroflavonol reductase [Source:UniProtKB/TrEMBL;Acc:B1GV15]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.