Factsheet for VIT_18s0001g12790.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0023g02090.t01	Wine grape	cytosol	44.37	39.13
VIT_18s0001g12800.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane, plastid	65.49	24.8
VIT_18s0001g12810.t01	Wine grape	cytosol	47.89	16.59
VIT_00s0361g00040.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	39.44	16.57
VIT_15s0048g01000.t01	Wine grape	cytosol, peroxisome, plastid	37.32	16.11
VIT_15s0048g00980.t01	Wine grape	golgi, peroxisome, plastid	36.62	15.9
VIT_15s0048g01010.t01	Wine grape	extracellular	37.32	15.82
VIT_15s0048g00990.t01	Wine grape	cytosol, golgi, peroxisome	35.92	15.6
VIT_18s0001g12820.t01	Wine grape	cytosol	46.48	15.53
VIT_15s0046g01150.t01	Wine grape	cytosol	22.54	13.17
VIT_19s0014g04980.t01	Wine grape	golgi, plasma membrane, plastid	35.92	12.69
VIT_02s0025g01260.t01	Wine grape	plastid	30.28	12.57
VIT_15s0046g01160.t01	Wine grape	mitochondrion	28.17	11.8
VIT_15s0046g01170.t01	Wine grape	cytosol	28.87	11.75
VIT_00s0361g00030.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	InterPro:3Beta_OHSteriod_DH/Estase	ProteinID:CBI19726	ProteinID:CBI19726.3	UniProt:E0CQF7
EMBL:FN595227	GO:GO:0003674	GO:GO:0003824	GO:GO:0003854	GO:GO:0006629	GO:GO:0006694
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016616	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf
PFAM:PF01073	PANTHER:PTHR10366	PANTHER:PTHR10366:SF276	SUPFAM:SSF51735	UniParc:UPI0001BE1B6A	ArrayExpress:VIT_18s0001g12790
EnsemblPlantsGene:VIT_18s0001g12790	EnsemblPlants:VIT_18s0001g12790.t01	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr18:-:10904961..10906204

Molecular Weight (calculated)

15796.1 Da

IEP (calculated)

6.235

GRAVY (calculated)

-0.178

Length

142 amino acids

Sequence
(BLAST)

001: MACYETPPAR LRGSGHCPRW QELEEGAAFA GLAKCRDVVI TMEGFDEAIQ GCTGVFHLAT PMDFESKDPE NEVIRPTING MLGIMKSCAK AKTVCRLVFT
101: SSAGTVCMQQ HKQSAYDERC WSDVEFCMAT KMTGWMYFVS KT

Best Arabidopsis Sequence Match ( AT5G42800.1 )
(BLAST)

001: MVSQKETVCV TGASGFIGSW LVMRLLERGY FVRATVRDPG NLKKVQHLLD LPNAKTLLTL WKADLSEEGS YDDAINGCDG VFHVATPMDF ESKDPENEVI
101: KPTVNGMLGI MKACVKAKTV RRFVFTSSAG TVNVEEHQKN VYDENDWSDL EFIMSKKMTG WMYFVSKTLA EKAAWDFAEE KGLDFISIIP TLVVGPFITT
201: SMPPSLITAL SPITRNEAHY SIIRQGQYVH LDDLCNAHIF LYEQAAAKGR YICSSHDATI LTISKFLRPK YPEYNVPSTF EGVDENLKSI EFSSKKLTDM
301: GFNFKYSLEE MFIESIETCR QKGFLPVSLS YQSISEIKTK NENIDVKTGD GLTDGMKPCN KTETGITGER TDAPMLAQQM CA

Arabidopsis Description

DFRADihydroflavonol reductase [Source:UniProtKB/TrEMBL;Acc:B1GV15]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.