Factsheet for VIT_15s0048g00990.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, cytosol

Predictor Summary:

cytosol 2
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0048g00980.t01	Wine grape	golgi, peroxisome, plastid	95.11	95.11
VIT_15s0048g01000.t01	Wine grape	cytosol, peroxisome, plastid	77.68	77.2
VIT_15s0048g01010.t01	Wine grape	extracellular	78.59	76.72
Solyc05g051010.2.1	Tomato	cytosol, endoplasmic reticulum	33.33	66.46
PGSC0003DMT400018059	Potato	cytosol	61.77	61.03
KRH20841	Soybean	cytosol	59.94	60.31
KRH40604	Soybean	peroxisome	59.63	59.82
KRH27495	Soybean	mitochondrion	60.24	59.52
Solyc05g051020.2.1	Tomato	cytosol, plastid	20.18	55.93
Solyc01g094070.2.1	Tomato	cytosol	55.35	55.86
KRH00562	Soybean	cytosol	55.66	55.66
KRH27494	Soybean	cytosol, endoplasmic reticulum, peroxisome	55.66	55.66
KRH40606	Soybean	cytosol	55.66	55.66
KRH40605	Soybean	cytosol	53.52	53.52
Bra004907.1-P	Field mustard	cytosol	47.71	50.0
PGSC0003DMT400060967	Potato	cytosol	45.57	49.83
CDY37037	Canola	mitochondrion	47.4	49.68
CDX74737	Canola	cytosol	52.6	48.86
CDY72000	Canola	cytosol	52.29	48.58
CDY57107	Canola	cytosol, peroxisome, plastid	52.29	47.77
KRH00563	Soybean	cytosol	54.13	47.58
Bra040313.1-P	Field mustard	cytosol, golgi, plastid	51.99	47.49
AT2G45400.1	Thale cress	cytosol	52.6	47.25
PGSC0003DMT400087830	Potato	cytosol	27.83	46.43
KRH27492	Soybean	cytosol, plastid	44.34	46.18
PGSC0003DMT400068748	Potato	cytoskeleton, cytosol, peroxisome	40.37	43.28
VIT_00s0361g00040.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	42.51	41.12
VIT_00s0361g00030.t01	Wine grape	cytosol	12.23	40.4
Solyc10g018140.1.1	Tomato	cytosol	30.58	39.84
VIT_18s0001g12800.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane, plastid	44.95	39.2
VIT_18s0001g12810.t01	Wine grape	cytosol	46.79	37.32
VIT_18s0001g12790.t01	Wine grape	cytosol	15.6	35.92
VIT_18s0001g12820.t01	Wine grape	cytosol	46.18	35.53
VIT_15s0046g01160.t01	Wine grape	mitochondrion	35.47	34.22
VIT_02s0025g01260.t01	Wine grape	plastid	35.78	34.21
VIT_19s0014g04980.t01	Wine grape	golgi, plasma membrane, plastid	41.28	33.58
VIT_04s0023g02090.t01	Wine grape	cytosol	16.21	32.92
VIT_15s0046g01150.t01	Wine grape	cytosol	24.16	32.51
VIT_15s0046g01170.t01	Wine grape	cytosol	33.33	31.23

Protein Annotations

EntrezGene:100259148	wikigene:100259148	EntrezGene:109121429	Gene3D:3.40.50.720	MapMan:35.1	ProteinID:CBI38846
ProteinID:CBI38846.3	UniProt:D7U7R7	InterPro:Epimerase_deHydtase	EMBL:FN596739	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0050662	EntrezGene:LOC100259148	wikigene:LOC100259148	InterPro:NAD(P)-bd_dom_sf	PFAM:PF01370
PANTHER:PTHR10366	PANTHER:PTHR10366:SF563	SUPFAM:SSF51735	TIGR:TC56462	UniParc:UPI00015CB1E7	ArrayExpress:VIT_15s0048g00990
EnsemblPlantsGene:VIT_15s0048g00990	EnsemblPlants:VIT_15s0048g00990.t01	unigene:Vvi.18548	RefSeq:XP_002278887	RefSeq:XP_002278887.1	:

Description

No Description!

Coordinates

chr15:-:15135374..15137240

Molecular Weight (calculated)

35952.9 Da

IEP (calculated)

5.218

GRAVY (calculated)

-0.104

Length

327 amino acids

Sequence
(BLAST)

001: MEGEKGRVCV TGGTGFIASW LVMKLLQHGY SVNATIRSHP QSKKDVSYLT NLPGASEKLR IYNADLSDPS SFEAAIEGCI GVFHVAHPVD FEDTEPEETV
101: TKRSVEGTLG ILKACLNSKT VKRVVYTSST AAVVLNDKGG DIKDESSWTD VDFLKALNYW GQSYMISKTI TERSALDFAQ EHGLDLVTVT PSFVVGPFIC
201: PRFPGSVNTA LALVLGDQQQ YHVLMNISMV HVDDVCSAHI FLLECPDAKG RYICSSDRLT LNEMSEFLSA KYPQLPIPTI DSLKEVQGYG TPGVSSKKLL
301: DTGFKYKYGL DEMFDEAIQC CKEKGFL

Best Arabidopsis Sequence Match ( AT2G45400.1 )
(BLAST)

001: MVREEQEEDD NNNNNNGGGE RKLLVADETV PSLLDETGLV CVTGGSGFVA SWLIMRLLQR GYSVRATVRT NSEGNKKDIS YLTELPFASE RLQIFTADLN
101: EPESFKPAIE GCKAVFHVAH PMDPNSNETE ETVTKRTVQG LMGILKSCLD AKTVKRFFYT SSAVTVFYSG GNGGGGGEVD ESVWSDVEVF RNQKEKRVSS
201: SYVVSKMAAE TAALEFGGKN GLEVVTLVIP LVVGPFISSS LPSSVFISLA MLFGNYKEKY LFDTYNMVHI DDVARAMIFL LEKPVAKGRY ICSSVEMKID
301: EVFEFLSTKF PQFQLPSIDL NKYKVEKRMG LSSKKLKSAG FEFKYGAEEI FSGAIRSCQA RGFL

Arabidopsis Description

BEN1Protein BRI1-5 ENHANCED 1 [Source:UniProtKB/Swiss-Prot;Acc:O22133]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.