Factsheet for PGSC0003DMT400018059

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g051020.2.1	Tomato	cytosol, plastid	33.84	94.92
VIT_15s0048g00980.t01	Wine grape	golgi, peroxisome, plastid	61.63	62.39
VIT_15s0048g00990.t01	Wine grape	cytosol, golgi, peroxisome	61.03	61.77
VIT_15s0048g01010.t01	Wine grape	extracellular	61.33	60.6
VIT_15s0048g01000.t01	Wine grape	cytosol, peroxisome, plastid	59.82	60.18
PGSC0003DMT400087830	Potato	cytosol	35.35	59.69
KRH20841	Soybean	cytosol	54.38	55.38
KRH40604	Soybean	peroxisome	53.78	54.6
KRH27495	Soybean	mitochondrion	53.78	53.78
KRH00562	Soybean	cytosol	51.96	52.6
KRH40606	Soybean	cytosol	51.66	52.29
PGSC0003DMT400060967	Potato	cytosol	47.13	52.17
KRH27494	Soybean	cytosol, endoplasmic reticulum, peroxisome	51.36	51.99
KRH40605	Soybean	cytosol	48.64	49.24
PGSC0003DMT400068748	Potato	cytoskeleton, cytosol, peroxisome	44.71	48.52
CDY72000	Canola	cytosol	50.45	47.44
CDY37037	Canola	mitochondrion	44.71	47.44
Bra004907.1-P	Field mustard	cytosol	44.71	47.44
CDX74737	Canola	cytosol	50.15	47.16
CDY57107	Canola	cytosol, peroxisome, plastid	49.85	46.09
Bra040313.1-P	Field mustard	cytosol, golgi, plastid	49.55	45.81
AT2G45400.1	Thale cress	cytosol	50.15	45.6
KRH00563	Soybean	cytosol	48.94	43.55
PGSC0003DMT400013000	Potato	extracellular	41.09	40.24
KRH27492	Soybean	cytosol, plastid	37.76	39.81
PGSC0003DMT400056128	Potato	cytosol	30.51	35.07
PGSC0003DMT400009287	Potato	cytosol	40.18	34.82
PGSC0003DMT400051197	Potato	cytosol	34.44	33.93
PGSC0003DMT400051196	Potato	cytosol	30.51	33.11

Protein Annotations

EnsemblPlants:PGSC0003DMT400018059	EnsemblPlantsGene:PGSC0003DMG400007016	EntrezGene:102587254	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF563
PFAM:PF01370	PGSC:PGSC0003DMG400007016	RefSeq:XP_006345512.1	RefSeq:XP_015163384.1	RefSeq:XP_015163385.1	SUPFAM:SSF51735
UniParc:UPI0002953646	UniProt:M1A9Z1	MapMan:35.1	:	:	:

Description

Cinnamoyl-CoA reductase [Source:PGSC_GENE;Acc:PGSC0003DMG400007016]

Coordinates

chr5:+:45576555..45580152

Molecular Weight (calculated)

37041.6 Da

IEP (calculated)

6.183

GRAVY (calculated)

-0.179

Length

331 amino acids

Sequence
(BLAST)

001: MEMDDSKGLV CVTGGTGYLA SWLIMKLLQH GYSVNATIRF TQDHKTDVCY LTNLPEASQR LRIFNADMDK PESFSAAIEG CVGVFHVAHP MNYGDQEIEE
101: EKIRKAVDGT LGILRECLNS KTVKRVVYTS SRTAVVFNDK GLDTVDESSW SDIHIMKTLE PISAASYVIS KTLTEKAALE FAEKHGLDLV TVIPSWIHGP
201: FLSPQFPEPL RPAMAMIYGN QENCMKYPSL TPFVHVDDVA NAHILLLENS KAKGRYICSA VEVTPDELFN FLSARYPEYR IPNVDSLREI GGIKHPRLSS
301: KKLLDTGFKY KYGLEEMFDG AIECCKQKGL L

Best Arabidopsis Sequence Match ( AT2G45400.1 )
(BLAST)

001: MVREEQEEDD NNNNNNGGGE RKLLVADETV PSLLDETGLV CVTGGSGFVA SWLIMRLLQR GYSVRATVRT NSEGNKKDIS YLTELPFASE RLQIFTADLN
101: EPESFKPAIE GCKAVFHVAH PMDPNSNETE ETVTKRTVQG LMGILKSCLD AKTVKRFFYT SSAVTVFYSG GNGGGGGEVD ESVWSDVEVF RNQKEKRVSS
201: SYVVSKMAAE TAALEFGGKN GLEVVTLVIP LVVGPFISSS LPSSVFISLA MLFGNYKEKY LFDTYNMVHI DDVARAMIFL LEKPVAKGRY ICSSVEMKID
301: EVFEFLSTKF PQFQLPSIDL NKYKVEKRMG LSSKKLKSAG FEFKYGAEEI FSGAIRSCQA RGFL

Arabidopsis Description

BEN1Protein BRI1-5 ENHANCED 1 [Source:UniProtKB/Swiss-Prot;Acc:O22133]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.