Factsheet for PGSC0003DMT400060967

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400018059	Potato	cytosol	52.17	47.13
VIT_15s0048g00980.t01	Wine grape	golgi, peroxisome, plastid	50.17	45.87
VIT_15s0048g00990.t01	Wine grape	cytosol, golgi, peroxisome	49.83	45.57
KRH40606	Soybean	cytosol	48.83	44.65
KRH00562	Soybean	cytosol	48.49	44.34
VIT_15s0048g01010.t01	Wine grape	extracellular	49.16	43.88
KRH27495	Soybean	mitochondrion	48.49	43.81
VIT_15s0048g01000.t01	Wine grape	cytosol, peroxisome, plastid	47.83	43.47
KRH27494	Soybean	cytosol, endoplasmic reticulum, peroxisome	47.49	43.43
KRH20841	Soybean	cytosol	47.16	43.38
Solyc01g094070.2.1	Tomato	cytosol	46.82	43.21
KRH40604	Soybean	peroxisome	46.82	42.94
KRH40605	Soybean	cytosol	46.49	42.51
PGSC0003DMT400087830	Potato	cytosol	26.09	39.8
KRH00563	Soybean	cytosol	46.49	37.37
CDY72000	Canola	cytosol	43.81	37.22
CDY37037	Canola	mitochondrion	38.8	37.18
CDX74737	Canola	cytosol	43.48	36.93
Bra004907.1-P	Field mustard	cytosol	38.13	36.54
CDY57107	Canola	cytosol, peroxisome, plastid	43.48	36.31
Bra040313.1-P	Field mustard	cytosol, golgi, plastid	43.48	36.31
AT2G45400.1	Thale cress	cytosol	43.14	35.44
PGSC0003DMT400068748	Potato	cytoskeleton, cytosol, peroxisome	34.78	34.1
PGSC0003DMT400013000	Potato	extracellular	35.79	31.66
KRH27492	Soybean	cytosol, plastid	31.1	29.62
PGSC0003DMT400009287	Potato	cytosol	37.79	29.58
PGSC0003DMT400051197	Potato	cytosol	30.77	27.38
PGSC0003DMT400056128	Potato	cytosol	25.75	26.74
PGSC0003DMT400051196	Potato	cytosol	25.75	25.25

Protein Annotations

EnsemblPlants:PGSC0003DMT400060967	EnsemblPlantsGene:PGSC0003DMG400023715	EntrezGene:102590116	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF563
PFAM:PF01370	PGSC:PGSC0003DMG400023715	RefSeq:XP_015165883.1	SUPFAM:SSF51735	UniParc:UPI000296FAD6	UniProt:M1C6S7
MapMan:35.1	:	:	:	:	:

Description

Cinnamoyl-CoA reductase [Source:PGSC_GENE;Acc:PGSC0003DMG400023715]

Coordinates

chr10:-:57588278..57590662

Molecular Weight (calculated)

33329.4 Da

IEP (calculated)

6.695

GRAVY (calculated)

-0.027

Length

299 amino acids

Sequence
(BLAST)

001: MEKINEKGIV CVTGGTGYVT SWLIMRLLQS GYYVNTTINN NMDEERASFL KKLPNASQKL KIFTTNHEDH ASYNPAIEGC NGVIIGHSVD FEDKYDDEER
101: KIQRSIDGIL GILKACLDSK TIKRVIYTSS DGTIGFIEGG PNVVDESFWS DIDFIKKMNP LGAFYCISKT LIEKEALNFA HKNGLDLVCV NHAWVFGPFV
201: TPQCPIIVLH NMAMILGNWT NIEYDSGVIA LVHVDDVART HIFLLESTKV KGSCLKVTKA FKCPCPCSKK LLDVGFKYKY SLEDMYDGAI ASCKQIGLL

Best Arabidopsis Sequence Match ( AT2G45400.1 )
(BLAST)

001: MVREEQEEDD NNNNNNGGGE RKLLVADETV PSLLDETGLV CVTGGSGFVA SWLIMRLLQR GYSVRATVRT NSEGNKKDIS YLTELPFASE RLQIFTADLN
101: EPESFKPAIE GCKAVFHVAH PMDPNSNETE ETVTKRTVQG LMGILKSCLD AKTVKRFFYT SSAVTVFYSG GNGGGGGEVD ESVWSDVEVF RNQKEKRVSS
201: SYVVSKMAAE TAALEFGGKN GLEVVTLVIP LVVGPFISSS LPSSVFISLA MLFGNYKEKY LFDTYNMVHI DDVARAMIFL LEKPVAKGRY ICSSVEMKID
301: EVFEFLSTKF PQFQLPSIDL NKYKVEKRMG LSSKKLKSAG FEFKYGAEEI FSGAIRSCQA RGFL

Arabidopsis Description

BEN1Protein BRI1-5 ENHANCED 1 [Source:UniProtKB/Swiss-Prot;Acc:O22133]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.