CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74737	Canola	cytosol	97.16	97.16
CDY37037	Canola	mitochondrion	80.68	91.03
CDY57107	Canola	cytosol, peroxisome, plastid	89.77	88.27
AT2G45400.1	Thale cress	cytosol	87.5	84.62
KRH40606	Soybean	cytosol	51.42	55.35
Solyc05g051010.2.1	Tomato	cytosol, endoplasmic reticulum	25.28	54.27
KRH00562	Soybean	cytosol	50.28	54.13
VIT_15s0048g01010.t01	Wine grape	extracellular	51.42	54.03
KRH20841	Soybean	cytosol	49.43	53.54
VIT_15s0048g00980.t01	Wine grape	golgi, peroxisome, plastid	49.43	53.21
KRH40605	Soybean	cytosol	49.43	53.21
VIT_15s0048g01000.t01	Wine grape	cytosol, peroxisome, plastid	49.72	53.19
KRH27495	Soybean	mitochondrion	49.43	52.57
KRH40604	Soybean	peroxisome	48.58	52.45
VIT_15s0048g00990.t01	Wine grape	cytosol, golgi, peroxisome	48.58	52.29
KRH27494	Soybean	cytosol, endoplasmic reticulum, peroxisome	48.01	51.68
PGSC0003DMT400018059	Potato	cytosol	47.44	50.45
Solyc01g094070.2.1	Tomato	cytosol	45.17	49.07
Solyc05g051020.2.1	Tomato	cytosol, plastid	16.19	48.31
KRH00563	Soybean	cytosol	50.28	47.58
PGSC0003DMT400060967	Potato	cytosol	37.22	43.81
PGSC0003DMT400087830	Potato	cytosol	23.01	41.33
PGSC0003DMT400068748	Potato	cytoskeleton, cytosol, peroxisome	33.52	38.69
KRH27492	Soybean	cytosol, plastid	34.09	38.22
CDY07276	Canola	cytosol	35.51	36.55
CDY25313	Canola	cytosol	34.94	36.39
CDY52321	Canola	cytosol	34.66	36.09
CDY32381	Canola	cytosol	34.94	35.65
CDX95155	Canola	cytosol	38.35	35.06
CDY52372	Canola	cytosol	38.07	34.81
Solyc10g018140.1.1	Tomato	cytosol	24.43	34.26
CDY21246	Canola	cytosol	23.3	33.61
CDX92822	Canola	cytosol	31.82	31.55
CDY46656	Canola	cytosol	31.82	31.55
CDY08270	Canola	cytosol	18.18	28.7
CDX89264	Canola	mitochondrion	22.73	25.24

Protein Annotations

EnsemblPlants:CDY72000	EnsemblPlantsGene:GSBRNA2T00022985001	Gene3D:3.40.50.720	GO:A0A078K043	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF560
PFAM:PF01370	ProteinID:CDY72000	ProteinID:CDY72000.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI0004EB05ED
UniProt:A0A078K043	MapMan:35.1	:	:	:	:

Description

BnaC04g53100DBnaC04g53100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078K043]

Coordinates

chrLK048470:-:27..2299

Molecular Weight (calculated)

38740.4 Da

IEP (calculated)

5.320

GRAVY (calculated)

-0.087

Length

352 amino acids

Sequence
(BLAST)

001: MGREEEDDNN GGGEMASSFL DGTGLVCVTG GTGFVASWLI MRLLQRGYSV HATVRTNPEG NKKDISYLTE LPLASERLKI FTADLNEPES FKPAIEGCKA
101: VFHVAHPMDP NSNETEEIVT KRTVQGLMGI LKSCVDAKTV KRFFYTSSAV TVFYGVGSGA GGNEGEVDES VWSDVDVFRN QEEKRVSSSY VVSKMAAEKA
201: ALEFGGNNGL EVATVVLPLV VGPFISPALP SSVFISLAMI FGNYKEKYLF DTYNMVHIDD VARAMIFLLE RPVAKGRYIC SSVEMKIDEV FELLSTKFPQ
301: FQLPSVDLKS YRVEKRMSLS SKKLRSAGFE FKYGADEIFT GAIKSCQTRG FL

Best Arabidopsis Sequence Match ( AT2G45400.1 )
(BLAST)

001: MVREEQEEDD NNNNNNGGGE RKLLVADETV PSLLDETGLV CVTGGSGFVA SWLIMRLLQR GYSVRATVRT NSEGNKKDIS YLTELPFASE RLQIFTADLN
101: EPESFKPAIE GCKAVFHVAH PMDPNSNETE ETVTKRTVQG LMGILKSCLD AKTVKRFFYT SSAVTVFYSG GNGGGGGEVD ESVWSDVEVF RNQKEKRVSS
201: SYVVSKMAAE TAALEFGGKN GLEVVTLVIP LVVGPFISSS LPSSVFISLA MLFGNYKEKY LFDTYNMVHI DDVARAMIFL LEKPVAKGRY ICSSVEMKID
301: EVFEFLSTKF PQFQLPSIDL NKYKVEKRMG LSSKKLKSAG FEFKYGAEEI FSGAIRSCQA RGFL

Arabidopsis Description

BEN1Protein BRI1-5 ENHANCED 1 [Source:UniProtKB/Swiss-Prot;Acc:O22133]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.