CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20841	Soybean	cytosol	54.46	52.62
KRH27495	Soybean	mitochondrion	55.41	52.57
KRH27494	Soybean	cytosol, endoplasmic reticulum, peroxisome	51.59	49.54
KRH40606	Soybean	cytosol	48.09	46.18
KRH40604	Soybean	peroxisome	47.77	46.01
KRH00562	Soybean	cytosol	47.77	45.87
KRH40605	Soybean	cytosol	46.5	44.65
VIT_15s0048g00990.t01	Wine grape	cytosol, golgi, peroxisome	46.18	44.34
VIT_15s0048g00980.t01	Wine grape	golgi, peroxisome, plastid	45.54	43.73
VIT_15s0048g01000.t01	Wine grape	cytosol, peroxisome, plastid	45.22	43.16
VIT_15s0048g01010.t01	Wine grape	extracellular	45.54	42.69
Solyc05g051020.2.1	Tomato	cytosol, plastid	15.61	41.53
KRH00563	Soybean	cytosol	46.18	38.98
PGSC0003DMT400018059	Potato	cytosol	39.81	37.76
CDY37037	Canola	mitochondrion	37.26	37.5
Bra004907.1-P	Field mustard	cytosol	36.62	36.86
Solyc05g051010.2.1	Tomato	cytosol, endoplasmic reticulum	19.11	36.59
Solyc01g094070.2.1	Tomato	cytosol	37.58	36.42
PGSC0003DMT400087830	Potato	cytosol	21.34	34.18
CDX74737	Canola	cytosol	38.22	34.09
CDY72000	Canola	cytosol	38.22	34.09
AT2G45400.1	Thale cress	cytosol	39.49	34.07
Bra040313.1-P	Field mustard	cytosol, golgi, plastid	37.9	33.24
CDY57107	Canola	cytosol, peroxisome, plastid	37.58	32.96
PGSC0003DMT400068748	Potato	cytoskeleton, cytosol, peroxisome	30.25	31.15
PGSC0003DMT400060967	Potato	cytosol	29.62	31.1
KRH15169	Soybean	plastid	34.39	31.03
KRH05851	Soybean	extracellular	12.1	30.65
Solyc10g018140.1.1	Tomato	cytosol	24.2	30.28
KRH71611	Soybean	nucleus	32.17	29.79
KRH05848	Soybean	plastid	33.44	29.66
KRH41990	Soybean	cytosol, extracellular	31.21	29.08
KRH41993	Soybean	golgi	29.94	27.81
KRH22215	Soybean	cytosol	14.33	25.57
KRH25898	Soybean	cytosol, extracellular	24.2	25.5
KRH27122	Soybean	cytosol	28.66	25.07
KRG97148	Soybean	cytosol	27.39	25.0
KRH68896	Soybean	cytosol	26.11	23.84
KRH55603	Soybean	mitochondrion	28.34	23.48
KRG97147	Soybean	cytosol, nucleus	25.16	23.24
KRH30756	Soybean	plastid	9.55	22.39

Protein Annotations

EMBL:ACUP02007810	EnsemblPlants:KRH27492	EnsemblPlantsGene:GLYMA_12G237900	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366
PANTHER:PTHR10366:SF558	ProteinID:KRH27492	ProteinID:KRH27492.1	SUPFAM:SSF51735	UniParc:UPI000295AD5F	UniProt:K7LWM7
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:+:39715962..39717797

Molecular Weight (calculated)

35313.1 Da

IEP (calculated)

6.239

GRAVY (calculated)

-0.289

Length

314 amino acids

Sequence
(BLAST)

001: MATSPSSMTK IEHSHAILFS PCETHEHSRS QEHRKDVSFL TSLPGSSQRL QILSADLSNP ESIGVFHVAT PVDFQVKEPE ETCLNSKTVK RVVYTTSVGA
101: VVCNSEEDQV MDESFWSDVD YLRSSKILKW SYAVSKTSTE KNGLDVVTIA PPLVLGPFIC PKLPDSISDA LNLSIWLSAC ACACFNSNNT RIEKCQKAIL
201: VEIYVERDKD PLAFNDRIMV HVEDVVRVHI FLLEHPDPKG RYICSSYNTP VERVYQFVSA KYPEVQQRTT DALKQNKGIR IPDLSAKKLI DAGFKFKYGP
301: EEMLDDTVQC CKEK

Best Arabidopsis Sequence Match ( AT2G45400.1 )
(BLAST)

001: MVREEQEEDD NNNNNNGGGE RKLLVADETV PSLLDETGLV CVTGGSGFVA SWLIMRLLQR GYSVRATVRT NSEGNKKDIS YLTELPFASE RLQIFTADLN
101: EPESFKPAIE GCKAVFHVAH PMDPNSNETE ETVTKRTVQG LMGILKSCLD AKTVKRFFYT SSAVTVFYSG GNGGGGGEVD ESVWSDVEVF RNQKEKRVSS
201: SYVVSKMAAE TAALEFGGKN GLEVVTLVIP LVVGPFISSS LPSSVFISLA MLFGNYKEKY LFDTYNMVHI DDVARAMIFL LEKPVAKGRY ICSSVEMKID
301: EVFEFLSTKF PQFQLPSIDL NKYKVEKRMG LSSKKLKSAG FEFKYGAEEI FSGAIRSCQA RGFL

Arabidopsis Description

BEN1Protein BRI1-5 ENHANCED 1 [Source:UniProtKB/Swiss-Prot;Acc:O22133]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.