CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1
golgi 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22215	Soybean	cytosol	42.62	86.93
KRH55603	Soybean	mitochondrion	77.44	73.35
KRH25898	Soybean	cytosol, extracellular	60.72	73.15
VIT_19s0014g04980.t01	Wine grape	golgi, plasma membrane, plastid	68.52	61.19
PGSC0003DMT400056128	Potato	cytosol	48.75	60.76
Solyc12g005350.1.1	Tomato	cytosol	57.1	60.12
CDY46656	Canola	cytosol	57.1	57.75
Bra019062.1-P	Field mustard	cytosol	56.55	57.34
AT4G27250.1	Thale cress	cytosol	55.99	56.78
CDX92822	Canola	cytosol	55.71	56.34
GSMUA_Achr5P00800_001	Banana	mitochondrion	53.76	51.6
CDX89264	Canola	mitochondrion	42.34	47.95
TraesCS7D01G440000.1	Wheat	cytosol	45.13	45.76
Os06t0683100-01	Rice	cytosol	46.52	45.5
HORVU7Hr1G101860.2	Barley	cytosol	42.06	45.35
TraesCS7A01G450700.1	Wheat	cytosol, plastid	44.29	44.79
TraesCS7B01G350500.1	Wheat	cytosol	44.01	44.76
Zm00001d014481_P001	Maize	cytosol	46.8	44.21
OQU76902	Sorghum	cytosol	45.96	42.42
KRH71611	Soybean	nucleus	39.55	41.89
KRH20841	Soybean	cytosol	36.77	40.62
KRH15169	Soybean	plastid	38.44	39.66
KRH27494	Soybean	cytosol, endoplasmic reticulum, peroxisome	35.38	38.84
KRH41990	Soybean	cytosol, extracellular	35.93	38.28
KRH05848	Soybean	plastid	37.33	37.85
KRH41993	Soybean	golgi	35.38	37.57
KRH27495	Soybean	mitochondrion	34.54	37.46
KRH40604	Soybean	peroxisome	33.7	37.12
KRH40606	Soybean	cytosol	33.43	36.7
KRH00562	Soybean	cytosol	32.59	35.78
KRH40605	Soybean	cytosol	32.31	35.47
KRH30756	Soybean	plastid	11.7	31.34
KRH00563	Soybean	cytosol	32.31	31.18
KRH68896	Soybean	cytosol	29.53	30.81
KRH05851	Soybean	extracellular	10.59	30.65
KRG97147	Soybean	cytosol, nucleus	28.69	30.29
KRG97148	Soybean	cytosol	28.69	29.94
KRH27492	Soybean	cytosol, plastid	25.07	28.66

Protein Annotations

EMBL:ACUP02007774	EnsemblPlants:KRH27122	EnsemblPlantsGene:GLYMA_12G215800	EntrezGene:100793923	Gene3D:3.40.50.720	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366
PANTHER:PTHR10366:SF350	PFAM:PF01370	ProteinID:KRH27122	ProteinID:KRH27122.1	SEG:seg	SUPFAM:SSF51735
UniParc:UPI000233CB95	UniProt:I1LUS6	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr12:-:37494604..37498356

Molecular Weight (calculated)

39542.6 Da

IEP (calculated)

7.154

GRAVY (calculated)

-0.015

Length

359 amino acids

Sequence
(BLAST)

001: MEEALFKTVK KSKGEIMGSS PATYCVTGAT GYIGSWLVEA LLERGYTVHA TVRDPEKSLH LLSLWTRGDR LRIFKADLNE ERSFDEAVKG CDGVFHVAAS
101: MEFNVVQKEN IEACVQANII DPAIKGTINL LKSCLNSNSV KRVVFTSSIS TITAKDSSGK WKPLVDESCQ IQSELVLKTQ ASGWVYALSK LLTEEAAFKF
201: AKENGIDLVS VITATVAGPF FTASVPSSVK VLLSPITGEP EFFKILSSVN ARMGSIALVH IEDICSAHIF LMEHSKAEGR YICSSQSCPL DMLANLLAKE
301: YSYSSKKRIA EKNYDNVPSE ISSKKLKELG FSYKHGLEDI IHQTIICCLD YGYLPPIRQ

Best Arabidopsis Sequence Match ( AT4G27250.1 )
(BLAST)

001: MELQGEESKT ATYCVTGASG YIGSWLVKSL LQRGYTVHAT LRDLAKSEYF QSKWKENERL RLFRADLRDD GSFDDAVKGC DGVFHVAASM EFDISSDHVN
101: LESYVQSKVI EPALKGVRNV LSSCLKSKSV KRVVFTSSIS TLTAKDENER MRSFVDETCK AHVDHVLKTQ ASGWIYVLSK LVSEEEAFRY AKERGMDLVS
201: VITTTVSGPF LTPFVPSSVQ VLLSPITGDS KLFAILSAVN KRMGSIALVH IEDICRAHLF LMEQPKAKGQ YICCVDNIDM HELMLHHFSK DYLCKVQKVN
301: EDEEERECMK PIISSKKLRE LGFEYKYGIE EIVDQTIDAS IKIKFPTLNH KLRQ

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8H1R1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.