CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040313.1-P	Field mustard	cytosol, golgi, plastid	99.68	86.87
CDY57107	Canola	cytosol, peroxisome, plastid	96.79	84.36
CDX74737	Canola	cytosol	91.67	81.25
CDY72000	Canola	cytosol	91.03	80.68
AT2G45400.1	Thale cress	cytosol	90.38	77.47
VIT_15s0048g01000.t01	Wine grape	cytosol, peroxisome, plastid	51.92	49.24
KRH40606	Soybean	cytosol	51.28	48.93
VIT_15s0048g01010.t01	Wine grape	extracellular	52.24	48.66
Solyc05g051020.2.1	Tomato	cytosol, plastid	18.27	48.31
KRH40605	Soybean	cytosol	50.32	48.01
VIT_15s0048g00980.t01	Wine grape	golgi, peroxisome, plastid	50.32	48.01
KRH00562	Soybean	cytosol	50.32	48.01
KRH20841	Soybean	cytosol	49.68	47.69
KRH40604	Soybean	peroxisome	49.68	47.55
VIT_15s0048g00990.t01	Wine grape	cytosol, golgi, peroxisome	49.68	47.4
KRH27495	Soybean	mitochondrion	50.0	47.13
KRH27494	Soybean	cytosol, endoplasmic reticulum, peroxisome	49.36	47.09
Solyc05g051010.2.1	Tomato	cytosol, endoplasmic reticulum	24.36	46.34
PGSC0003DMT400018059	Potato	cytosol	47.44	44.71
Solyc01g094070.2.1	Tomato	cytosol	44.87	43.21
KRH00563	Soybean	cytosol	50.96	42.74
PGSC0003DMT400087830	Potato	cytosol	26.28	41.84
PGSC0003DMT400068748	Potato	cytoskeleton, cytosol, peroxisome	38.46	39.34
PGSC0003DMT400060967	Potato	cytosol	37.18	38.8
KRH27492	Soybean	cytosol, plastid	37.5	37.26
Solyc10g018140.1.1	Tomato	cytosol	28.21	35.06
CDY07276	Canola	cytosol	37.18	33.92
CDY32381	Canola	cytosol	36.54	33.04
CDY25313	Canola	cytosol	35.58	32.84
CDY52321	Canola	cytosol	35.26	32.54
CDX95155	Canola	cytosol	39.1	31.69
CDY52372	Canola	cytosol	39.1	31.69
CDY21246	Canola	cytosol	22.76	29.1
CDX92822	Canola	cytosol	31.73	27.89
CDY46656	Canola	cytosol	31.41	27.61
CDY08270	Canola	cytosol	19.55	27.35
CDX89264	Canola	mitochondrion	22.76	22.4

Protein Annotations

EnsemblPlants:CDY37037	EnsemblPlantsGene:GSBRNA2T00063244001	Gene3D:3.40.50.720	GO:A0A078HGR4	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF560
PFAM:PF01370	ProteinID:CDY37037	ProteinID:CDY37037.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI0004EEF4F7
UniProt:A0A078HGR4	MapMan:35.1	:	:	:	:

Description

BnaA04g26150DBnaA04g26150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HGR4]

Coordinates

chrLK032390:-:120546..124778

Molecular Weight (calculated)

34717.9 Da

IEP (calculated)

8.808

GRAVY (calculated)

-0.058

Length

312 amino acids

Sequence
(BLAST)

001: MRLLQRGYSV RATVRTNPEG SKKDISYLTE LPFASERLKI FTADLNEPES FKPAIEGCKA VFHVAHPMDP TSNETEETVT KRTVQGLMGI LKSCLDAKTV
101: KRFFYTSSAV TVFYGVGSGV GGNGGVVDES VWSDVEVFRN QKEKRVSSSY VVSKMAAEMT ALEFGGKNGL EVVTLVIPLV VGPFISQSLP SSVFISLAMI
201: FGNYKEKYLF DTYNMVHIDD VARAMIFLLE KPIAKGRYIC SSVEMNVDEV FEFLSTRFPQ FQLPSVDLKS YRVEKRMSLS SKKLRSAGFE FKHGADDIFT
301: GAIKSCQARG FL

Best Arabidopsis Sequence Match ( AT2G45400.1 )
(BLAST)

001: MVREEQEEDD NNNNNNGGGE RKLLVADETV PSLLDETGLV CVTGGSGFVA SWLIMRLLQR GYSVRATVRT NSEGNKKDIS YLTELPFASE RLQIFTADLN
101: EPESFKPAIE GCKAVFHVAH PMDPNSNETE ETVTKRTVQG LMGILKSCLD AKTVKRFFYT SSAVTVFYSG GNGGGGGEVD ESVWSDVEVF RNQKEKRVSS
201: SYVVSKMAAE TAALEFGGKN GLEVVTLVIP LVVGPFISSS LPSSVFISLA MLFGNYKEKY LFDTYNMVHI DDVARAMIFL LEKPVAKGRY ICSSVEMKID
301: EVFEFLSTKF PQFQLPSIDL NKYKVEKRMG LSSKKLKSAG FEFKYGAEEI FSGAIRSCQA RGFL

Arabidopsis Description

BEN1Protein BRI1-5 ENHANCED 1 [Source:UniProtKB/Swiss-Prot;Acc:O22133]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.