Factsheet for PGSC0003DMT400009287

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
vacuole 1
plastid 1
golgi 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400036565
PGSC0003DMT400049165
PGSC0003DMT400076178
PGSC0003DMT400076179

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G42800.1	PGSC0003DMT400036565	AT5G08640.1	18467451
AT5G42800.1	PGSC0003DMT400049165	AT5G13930.1	10536025
AT5G42800.1	PGSC0003DMT400076178	AT5G13930.1	10536025
AT5G42800.1	PGSC0003DMT400076179	AT5G13930.1	10536025
AT5G42800.1	PGSC0003DMT400049165	AT5G13930.1	21669202
AT5G42800.1	PGSC0003DMT400076178	AT5G13930.1	21669202
AT5G42800.1	PGSC0003DMT400076179	AT5G13930.1	21669202

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g085020.2.1	Tomato	cytosol	95.29	96.04
KRH15169	Soybean	plastid	60.99	66.95
VIT_04s0023g02090.t01	Wine grape	cytosol	27.49	65.22
KRH05848	Soybean	plastid	60.21	64.97
AT5G42800.1	Thale cress	cytosol	61.26	61.26
KRH71611	Soybean	nucleus	53.93	60.77
GSMUA_Achr4P24540_001	Banana	cytosol, golgi, plastid	55.76	60.51
Bra027457.1-P	Field mustard	cytosol	60.47	60.0
CDX95155	Canola	cytosol	60.47	60.0
CDY52372	Canola	cytosol	60.47	60.0
EES01135	Sorghum	cytosol	54.45	59.43
TraesCS3D01G224600.1	Wheat	cytosol, extracellular, plastid	54.45	58.76
CDY21246	Canola	cytosol	37.17	58.2
TraesCS3A01G226600.1	Wheat	nucleus	53.66	57.91
HORVU3Hr1G056560.2	Barley	cytosol	53.14	57.34
EES19023	Sorghum	cytosol, peroxisome, plastid	53.93	56.91
EES04562	Sorghum	plastid	53.66	56.63
Zm00001d044122_P001	Maize	plastid	52.36	56.02
Zm00001d011438_P001	Maize	extracellular	52.62	55.68
Os01t0633500-00	Rice	cytosol, mitochondrion, plasma membrane, plastid	45.03	54.26
TraesCS3B01G257900.2	Wheat	plastid	54.71	54.15
EES01136	Sorghum	plastid	52.88	51.93
KRH05851	Soybean	extracellular	16.75	51.61
HORVU6Hr1G047380.1	Barley	peroxisome	18.06	43.67
PGSC0003DMT400013000	Potato	extracellular	37.17	42.01
HORVU6Hr1G048650.1	Barley	endoplasmic reticulum, plasma membrane	17.28	41.51
PGSC0003DMT400018059	Potato	cytosol	34.82	40.18
PGSC0003DMT400060967	Potato	cytosol	29.58	37.79
PGSC0003DMT400056128	Potato	cytosol	27.75	36.81
PGSC0003DMT400087830	Potato	cytosol	18.85	36.73
PGSC0003DMT400051196	Potato	cytosol	27.75	34.75
PGSC0003DMT400051197	Potato	cytosol	30.1	34.23
PGSC0003DMT400068748	Potato	cytoskeleton, cytosol, peroxisome	25.39	31.8

Protein Annotations

EntrezGene:102587107	Gene3D:3.40.50.720	MapMan:9.2.2.9.1	ProteinID:AAM73809	ProteinID:AAM73809.1	ProteinID:AAQ54578
ProteinID:AAQ54578.1	ProteinID:AAQ54579	ProteinID:AAQ54579.1	ProteinID:AAQ54580	ProteinID:AAQ54580.1	ProteinID:AAQ54581
ProteinID:AAQ54581.1	ProteinID:AAZ57436	ProteinID:AAZ57436.1	ProteinID:AEG64707	ProteinID:AEG64707.1	ProteinID:AEN83503
ProteinID:AEN83503.1	EMBL:AF449422	EMBL:AY289921	EMBL:AY289922	EMBL:AY289923	EMBL:AY289924
EMBL:DQ132997	InterPro:Epimerase_deHydtase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0045552	GO:GO:0050662	GO:GO:0055114	EMBL:HQ659495
EMBL:JF754579	InterPro:NAD(P)-bd_dom_sf	RefSeq:NP_001275409.1	PFAM:PF01370	EnsemblPlantsGene:PGSC0003DMG400003605	PGSC:PGSC0003DMG400003605
EnsemblPlants:PGSC0003DMT400009287	PANTHER:PTHR10366	PANTHER:PTHR10366:SF276	UniProt:Q6WG04	SUPFAM:SSF51735	UniParc:UPI0000236DCC
SEG:seg	:	:	:	:	:

Description

Dihydroflavonol 4-reductase [Source:PGSC_GENE;Acc:PGSC0003DMG400003605]

Coordinates

chr2:+:40293862..40297510

Molecular Weight (calculated)

42472.0 Da

IEP (calculated)

5.973

GRAVY (calculated)

-0.171

Length

382 amino acids

Sequence
(BLAST)

001: MASEVHAVVD AHSPPKTPTV CVTGAAGFIG SWLVMRLLER GYNVHATVRD PENQKKVKHL LELPKADTNL TLWKADLAVE GSFDEAIQGC QGVFHVATPM
101: DFESKDPENE VIKPTVRGVL SIIESCAKAN TVKRLVFTSS AGALDVQEDQ KLFCDETSWS DLDFIYAKKM TGWMYFVSKI LAEKAAMEEA KKNNIDLISI
201: IPPLVVGPFI TPTFPPSLIT ALSLITGNEA HYGIIKQGQY VHLDDLCEAH IFLYEHPKAE GRFICSSHHA IIYDVAKMVR QKWPEYYVPT EFKGIDKDLP
301: IVSFSSKKLM DMGFLFKYTL EDMYKGAIET CRQKQLLPFS TQSTADNGRD KEAIPIPTEN YSSGKENAPV ANCTGKLTNG EI

Best Arabidopsis Sequence Match ( AT5G42800.1 )
(BLAST)

001: MVSQKETVCV TGASGFIGSW LVMRLLERGY FVRATVRDPG NLKKVQHLLD LPNAKTLLTL WKADLSEEGS YDDAINGCDG VFHVATPMDF ESKDPENEVI
101: KPTVNGMLGI MKACVKAKTV RRFVFTSSAG TVNVEEHQKN VYDENDWSDL EFIMSKKMTG WMYFVSKTLA EKAAWDFAEE KGLDFISIIP TLVVGPFITT
201: SMPPSLITAL SPITRNEAHY SIIRQGQYVH LDDLCNAHIF LYEQAAAKGR YICSSHDATI LTISKFLRPK YPEYNVPSTF EGVDENLKSI EFSSKKLTDM
301: GFNFKYSLEE MFIESIETCR QKGFLPVSLS YQSISEIKTK NENIDVKTGD GLTDGMKPCN KTETGITGER TDAPMLAQQM CA

Arabidopsis Description

DFRADihydroflavonol reductase [Source:UniProtKB/TrEMBL;Acc:B1GV15]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.