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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • cytosol 2
  • plastid 4
  • peroxisome 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, peroxisome, plastid
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:peroxisome
Plant-mPloc:cytosol, plastid
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
EER90629
EES00073
EES07584
EES08604
EES09858
EES09859
EES09860
EES09862
EES09863
EES09864
EES09865
EES14634
KXG29016

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G42800.1 EER90629 AT3G55120.1 10536025
AT5G42800.1 EES00073 AT5G08640.1 18467451
AT5G42800.1 EES07584 AT5G08640.1 18467451
AT5G42800.1 EES08604 AT5G13930.1 10536025
AT5G42800.1 EES09858 AT5G13930.1 10536025
AT5G42800.1 EES09859 AT5G13930.1 10536025
AT5G42800.1 EES09860 AT5G13930.1 10536025
AT5G42800.1 EES09862 AT5G13930.1 10536025
AT5G42800.1 EES09863 AT5G13930.1 10536025
AT5G42800.1 EES09864 AT5G13930.1 10536025
AT5G42800.1 EES09865 AT5G13930.1 10536025
AT5G42800.1 EES14634 AT5G13930.1 10536025
AT5G42800.1 KXG29016 AT5G13930.1 10536025
AT5G42800.1 EES08604 AT5G13930.1 21669202
AT5G42800.1 EES09858 AT5G13930.1 21669202
AT5G42800.1 EES09859 AT5G13930.1 21669202
AT5G42800.1 EES09860 AT5G13930.1 21669202
AT5G42800.1 EES09862 AT5G13930.1 21669202
AT5G42800.1 EES09863 AT5G13930.1 21669202
AT5G42800.1 EES09864 AT5G13930.1 21669202
AT5G42800.1 EES09865 AT5G13930.1 21669202
AT5G42800.1 EES14634 AT5G13930.1 21669202
AT5G42800.1 KXG29016 AT5G13930.1 21669202
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES01135 Sorghum cytosol 82.6 85.43
EES19023 Sorghum cytosol, peroxisome, plastid 83.15 83.15
EES01136 Sorghum plastid 83.7 77.89
TraesCS3D01G224600.1 Wheat cytosol, extracellular, plastid 75.14 76.84
TraesCS3A01G226600.1 Wheat nucleus 74.03 75.71
HORVU3Hr1G056560.2 Barley cytosol 73.48 75.14
TraesCS3B01G257900.2 Wheat plastid 74.31 69.69
Os01t0633500-00 Rice cytosol, mitochondrion, plasma membrane, plastid 60.5 69.09
GSMUA_Achr3P31110_001 Banana cytosol, endoplasmic reticulum, plastid 66.02 67.13
GSMUA_Achr4P10640_001 Banana cytosol 63.81 65.62
KRH15169 Soybean plastid 60.22 62.64
KRH05848 Soybean plastid 58.84 60.17
VIT_04s0023g02090.t01 Wine grape cytosol 25.97 58.39
VIT_18s0001g12800.t01 Wine grape endoplasmic reticulum, golgi, plasma membrane, plastid 60.22 58.13
KRH71611 Soybean nucleus 54.42 58.11
AT5G42800.1 Thale cress cytosol 57.73 54.71
Bra027457.1-P Field mustard cytosol 58.01 54.55
CDY52372 Canola cytosol 58.01 54.55
CDX95155 Canola cytosol 57.46 54.03
PGSC0003DMT400009287 Potato cytosol 56.63 53.66
Solyc02g085020.2.1 Tomato cytosol 55.8 53.3
KRH05851 Soybean extracellular 17.4 50.81
CDY21246 Canola cytosol 33.15 49.18
EES11482 Sorghum cytosol, mitochondrion, plastid 38.12 40.12
EES11487 Sorghum mitochondrion 37.29 39.59
OQU82391 Sorghum cytosol, mitochondrion 34.81 39.5
KXG27183 Sorghum cytosol 37.02 39.3
EES11485 Sorghum mitochondrion 36.19 38.53
KXG27184 Sorghum cytosol 36.46 38.48
KXG27175 Sorghum cytosol 35.91 37.9
KXG27176 Sorghum cytosol, mitochondrion, plastid 35.91 37.68
KXG27182 Sorghum cytosol 35.08 36.71
EES11483 Sorghum cytosol 34.25 35.84
OQU76902 Sorghum cytosol 36.46 33.93
OQU82393 Sorghum plastid 36.19 33.76
OQU90211 Sorghum cytosol 29.01 30.79
EES14013 Sorghum cytosol 29.56 30.14
EER88741 Sorghum peroxisome 29.01 29.58
OQU76794 Sorghum cytosol, peroxisome, plastid 22.93 26.43
KXG36638 Sorghum mitochondrion 27.9 25.51
Protein Annotations
EnsemblPlants:EES04562EnsemblPlantsGene:SORBI_3004G050200EntrezGene:8076097Gene3D:3.40.50.720GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0050662InterPro:Epimerase_deHydtaseInterPro:NAD(P)-bd_dom_sfPANTHER:PTHR10366PANTHER:PTHR10366:SF276
PFAM:PF01370ProteinID:EES04562ProteinID:EES04562.1RefSeq:XP_002451586.1SEG:segSUPFAM:SSF51735
UniParc:UPI0001A8555FUniProt:C5XVF8MapMan:9.2.2.9.1:::
Description
hypothetical protein
Coordinates
chr4:+:4051667..4053206
Molecular Weight (calculated)
38696.0 Da
IEP (calculated)
4.832
GRAVY (calculated)
0.016
Length
362 amino acids
Sequence
(BLAST)
001: MEGGGSAAKG PVVVTGASGF VGSWLVMKLL QAGYTVRATV RDPANAAKTK PLLDLPGATE RLSIWKADLA EEGSFDDAIR GCTGVFHVAT PLDFESQDPE
101: NEVIKPAVEG VISILRACKE AAAAGGGTVR RVVFTSSAGT CSVEERQRPV YGDDDWSDVD FCRRAKMTGW MYFVSKTLAE KAALAYAAEH GVDLVSIIPT
201: LVVGPFVSSG MPPSLVTALA LVTGNEAHYS ILKQVQFVHL DDLCDAEIFL FEHPAAAAGR YVCSSHDATI HGLAAMLRDR YPEYDIPQRF PGIEDDLQPV
301: RFSSKKLLDH GFTFKYTAME DMFDAAIRTC REKGLIPLAT AGGGGDDSAS VRAPGETDVT IV
Best Arabidopsis Sequence Match ( AT5G42800.1 )
(BLAST)
001: MVSQKETVCV TGASGFIGSW LVMRLLERGY FVRATVRDPG NLKKVQHLLD LPNAKTLLTL WKADLSEEGS YDDAINGCDG VFHVATPMDF ESKDPENEVI
101: KPTVNGMLGI MKACVKAKTV RRFVFTSSAG TVNVEEHQKN VYDENDWSDL EFIMSKKMTG WMYFVSKTLA EKAAWDFAEE KGLDFISIIP TLVVGPFITT
201: SMPPSLITAL SPITRNEAHY SIIRQGQYVH LDDLCNAHIF LYEQAAAKGR YICSSHDATI LTISKFLRPK YPEYNVPSTF EGVDENLKSI EFSSKKLTDM
301: GFNFKYSLEE MFIESIETCR QKGFLPVSLS YQSISEIKTK NENIDVKTGD GLTDGMKPCN KTETGITGER TDAPMLAQQM CA
Arabidopsis Description
DFRADihydroflavonol reductase [Source:UniProtKB/TrEMBL;Acc:B1GV15]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.