Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- cytosol 4
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KXG29016 | Sorghum | cytosol | 99.5 | 99.5 |
EES09863 | Sorghum | cytosol | 99.5 | 99.5 |
EES09860 | Sorghum | cytosol | 99.5 | 99.5 |
EES09859 | Sorghum | cytosol | 99.5 | 99.5 |
EES09865 | Sorghum | cytosol | 99.25 | 99.25 |
EES09858 | Sorghum | cytosol | 99.25 | 99.25 |
EES09862 | Sorghum | cytosol | 99.0 | 99.0 |
EES09864 | Sorghum | cytosol | 98.0 | 98.25 |
Zm00001d052673_P001 | Maize | cytosol | 93.52 | 93.75 |
Os11t0530600-01 | Rice | cytosol, mitochondrion, plasma membrane | 92.52 | 93.22 |
Zm00001d007403_P001 | Maize | cytosol | 92.27 | 92.27 |
GSMUA_Achr6P16370_001 | Banana | cytosol, mitochondrion, plastid | 69.33 | 88.82 |
GSMUA_Achr6P10910_001 | Banana | cytosol, mitochondrion | 70.32 | 85.98 |
KRH42776 | Soybean | cytosol | 54.36 | 85.49 |
VIT_14s0068g00930.t01 | Wine grape | cytosol | 83.54 | 85.24 |
GSMUA_Achr10P... | Banana | cytosol | 68.83 | 85.19 |
Solyc09g091510.2.1 | Tomato | cytosol, extracellular | 82.54 | 85.09 |
Solyc05g053550.2.1 | Tomato | cytosol, mitochondrion | 82.54 | 85.09 |
PGSC0003DMT400076178 | Potato | cytosol | 82.54 | 85.09 |
VIT_14s0068g00920.t01 | Wine grape | cytosol | 83.29 | 84.99 |
PGSC0003DMT400049165 | Potato | cytosol, mitochondrion | 82.29 | 84.83 |
KRH42759 | Soybean | cytosol | 82.04 | 84.79 |
KRH42783 | Soybean | cytosol | 81.8 | 84.54 |
KRH42758 | Soybean | cytosol | 81.8 | 84.54 |
KRH42775 | Soybean | cytosol | 81.8 | 84.54 |
KRH42778 | Soybean | cytosol | 81.8 | 84.54 |
KRH42780 | Soybean | cytosol | 81.8 | 84.54 |
KRH58872 | Soybean | cytosol | 81.8 | 84.54 |
VIT_05s0136g00260.t01 | Wine grape | cytosol | 81.8 | 84.32 |
KRH42757 | Soybean | cytosol | 81.55 | 84.28 |
KRH42760 | Soybean | cytosol | 81.3 | 84.02 |
CDX78547 | Canola | cytosol | 82.54 | 84.01 |
CDX69618 | Canola | cytosol | 82.54 | 83.8 |
CDX91090 | Canola | cytosol | 82.54 | 83.59 |
CDX70528 | Canola | cytosol | 82.54 | 83.59 |
Bra008792.1-P | Field mustard | cytosol | 82.29 | 83.54 |
KRH75544 | Soybean | cytosol | 80.8 | 83.51 |
CDY09836 | Canola | cytosol | 82.04 | 83.29 |
AT5G13930.1 | Thale cress | cytosol | 82.04 | 83.29 |
KRH71115 | Soybean | cytosol | 80.55 | 83.25 |
KRH37579 | Soybean | cytosol | 80.55 | 83.25 |
KRG94730 | Soybean | cytosol | 80.8 | 82.86 |
Bra006224.1-P | Field mustard | cytosol | 81.8 | 82.83 |
Bra023441.1-P | Field mustard | cytosol | 81.3 | 82.74 |
EES14634 | Sorghum | cytosol | 81.55 | 82.16 |
KRH27737 | Soybean | cytosol | 79.05 | 81.49 |
KRH77699 | Soybean | endoplasmic reticulum | 78.8 | 81.23 |
Bra020688.1-P | Field mustard | cytosol | 77.81 | 79.19 |
CDY51056 | Canola | cytosol | 77.56 | 78.93 |
Bra036307.1-P | Field mustard | cytosol | 77.31 | 78.88 |
PGSC0003DMT400076179 | Potato | cytosol | 74.06 | 78.36 |
CDY05664 | Canola | cytosol | 76.81 | 78.17 |
GSMUA_Achr10P... | Banana | mitochondrion | 64.34 | 75.22 |
CDY07114 | Canola | cytosol | 75.81 | 74.15 |
CDY05666 | Canola | mitochondrion | 68.08 | 65.31 |
EER99419 | Sorghum | cytosol | 53.62 | 53.22 |
OQU85107 | Sorghum | cytosol | 52.12 | 52.38 |
OQU85124 | Sorghum | cytosol | 51.87 | 52.13 |
EES15677 | Sorghum | cytosol | 51.37 | 50.86 |
KXG36274 | Sorghum | cytosol | 50.12 | 50.63 |
KXG28549 | Sorghum | cytosol | 32.42 | 50.58 |
EER99418 | Sorghum | cytosol | 50.37 | 50.5 |
EES09995 | Sorghum | cytosol | 50.62 | 50.25 |
EES08732 | Sorghum | cytosol | 50.62 | 50.25 |
EES09649 | Sorghum | cytosol | 49.63 | 49.5 |
EES08596 | Sorghum | cytosol | 49.38 | 48.41 |
EES15184 | Sorghum | cytosol | 48.13 | 47.07 |
OQU83574 | Sorghum | cytosol | 47.13 | 46.67 |
EES08602 | Sorghum | cytosol, mitochondrion | 46.13 | 45.68 |
EES08598 | Sorghum | cytosol | 45.89 | 45.54 |
EES15556 | Sorghum | cytosol, mitochondrion | 42.89 | 45.14 |
EES08603 | Sorghum | cytosol, mitochondrion | 46.63 | 44.63 |
OQU83561 | Sorghum | cytosol | 35.16 | 43.93 |
OQU83321 | Sorghum | cytosol | 44.64 | 43.77 |
OQU86627 | Sorghum | mitochondrion | 40.15 | 43.28 |
EER95816 | Sorghum | cytosol | 45.89 | 42.79 |
KXG28978 | Sorghum | cytosol | 32.92 | 42.04 |
OQU83573 | Sorghum | cytosol | 35.91 | 40.68 |
KXG28544 | Sorghum | cytosol | 36.41 | 39.04 |
EER98407 | Sorghum | cytosol | 38.65 | 37.08 |
EER91459 | Sorghum | cytosol | 34.91 | 28.87 |
Protein Annotations
KEGG:00941+2.3.1.74 | Gene3D:3.40.47.10 | EntrezGene:8056975 | MapMan:9.2.2.1.1.1 | UniProt:C5Y3P5 | InterPro:Chalcone/stilbene_synth_C |
InterPro:Chalcone/stilbene_synthase_AS | InterPro:Chalcone/stilbene_synthase_N | EnsemblPlants:EES08604 | ProteinID:EES08604 | ProteinID:EES08604.1 | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009813 | GO:GO:0016210 |
GO:GO:0016740 | GO:GO:0016746 | GO:GO:0016747 | InterPro:IPR016039 | PFAM:PF00195 | PFAM:PF02797 |
PIRSF:PIRSF000451 | ScanProsite:PS00441 | PANTHER:PTHR11877 | PANTHER:PTHR11877:SF44 | MetaCyc:PWY-5135 | MetaCyc:PWY-6316 |
MetaCyc:PWY-6787 | MetaCyc:PWY-7397 | InterPro:Polyketide_synthase_type-III | EnsemblPlantsGene:SORBI_3005G136200 | SUPFAM:SSF53901 | unigene:Sbi.20215 |
InterPro:Thiolase-like | UniParc:UPI0001A86488 | RefSeq:XP_002449616.1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr5:+:58859095..58862916
Molecular Weight (calculated)
43692.7 Da
IEP (calculated)
6.513
GRAVY (calculated)
-0.100
Length
401 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAATVTVEE VRKAQRATGP ATVLAIGTAT PANCVHQADY PDYYFRITKS EHMTELKEKF KRMCDKSQIR KRYMHLTEEY LAENPNMCAY MAPSLDARQD
101: IVVVEVPKLG KAAAQKAIKE WGQPKSKITH LVFCTTSGVD MPGADYQLTK MLGLRPSVNR LMMYQQGCFA GGTVLRVAKD LAENNRGARV LVVCSEITAV
201: TFRGPSESHL DSMVGQALFG DGAAAVIVGA DPDERVERPL FQLVSASQTI LPDSEGAIDG HLREVGLTFH LLKDVPGLIS KNIERSLEEA FKPLGITDYN
301: SIFWVAHPGG PAILDQVEAK VGLEKERMRA TRHVLSEYGN MSSACVLFIL DEMRKRSAED GQATTGEGFD WGVLFGFGPG LTVETVVLHS VPITTGAAIT
401: A
101: IVVVEVPKLG KAAAQKAIKE WGQPKSKITH LVFCTTSGVD MPGADYQLTK MLGLRPSVNR LMMYQQGCFA GGTVLRVAKD LAENNRGARV LVVCSEITAV
201: TFRGPSESHL DSMVGQALFG DGAAAVIVGA DPDERVERPL FQLVSASQTI LPDSEGAIDG HLREVGLTFH LLKDVPGLIS KNIERSLEEA FKPLGITDYN
301: SIFWVAHPGG PAILDQVEAK VGLEKERMRA TRHVLSEYGN MSSACVLFIL DEMRKRSAED GQATTGEGFD WGVLFGFGPG LTVETVVLHS VPITTGAAIT
401: A
001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
Arabidopsis Description
PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.