Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os11t0529800-00 | Rice | cytosol, extracellular | 62.72 | 63.34 |
| EES08596 | Sorghum | cytosol | 63.46 | 62.84 |
| KXG28549 | Sorghum | cytosol | 39.51 | 62.26 |
| EES08602 | Sorghum | cytosol, mitochondrion | 61.23 | 61.23 |
| EES08598 | Sorghum | cytosol | 60.99 | 61.14 |
| Os11t0529500-00 | Rice | cytosol | 61.98 | 60.77 |
| EER99418 | Sorghum | cytosol | 57.53 | 58.25 |
| KXG36274 | Sorghum | cytosol | 57.04 | 58.19 |
| EES08603 | Sorghum | cytosol, mitochondrion | 59.75 | 57.76 |
| OQU85107 | Sorghum | cytosol | 56.79 | 57.64 |
| OQU85124 | Sorghum | cytosol | 56.54 | 57.39 |
| EER99419 | Sorghum | cytosol | 54.57 | 54.7 |
| EES08732 | Sorghum | cytosol | 54.32 | 54.46 |
| EES09995 | Sorghum | cytosol | 54.32 | 54.46 |
| EES15184 | Sorghum | cytosol | 53.09 | 52.44 |
| EES15677 | Sorghum | cytosol | 52.35 | 52.35 |
| EES15556 | Sorghum | cytosol, mitochondrion | 47.9 | 50.92 |
| KXG28978 | Sorghum | cytosol | 39.26 | 50.64 |
| KXG28544 | Sorghum | cytosol | 45.93 | 49.73 |
| OQU83573 | Sorghum | cytosol | 43.46 | 49.72 |
| OQU83561 | Sorghum | cytosol | 39.26 | 49.53 |
| EER95816 | Sorghum | cytosol | 51.85 | 48.84 |
| OQU86627 | Sorghum | mitochondrion | 44.44 | 48.39 |
| EES09863 | Sorghum | cytosol | 46.91 | 47.38 |
| EES14634 | Sorghum | cytosol | 46.42 | 47.24 |
| EES09862 | Sorghum | cytosol | 46.67 | 47.13 |
| KXG29016 | Sorghum | cytosol | 46.67 | 47.13 |
| EES09860 | Sorghum | cytosol | 46.67 | 47.13 |
| EES09859 | Sorghum | cytosol | 46.67 | 47.13 |
| EES08604 | Sorghum | cytosol | 46.67 | 47.13 |
| EES09865 | Sorghum | cytosol | 46.42 | 46.88 |
| EES09858 | Sorghum | cytosol | 46.42 | 46.88 |
| EES09864 | Sorghum | cytosol | 46.17 | 46.75 |
| EES09649 | Sorghum | cytosol | 40.74 | 41.04 |
| OQU83321 | Sorghum | cytosol | 40.49 | 40.1 |
| EER98407 | Sorghum | cytosol | 38.27 | 37.08 |
| EER91459 | Sorghum | cytosol | 36.05 | 30.1 |
| VIT_12s0059g01780.t01 | Wine grape | extracellular, mitochondrion, nucleus | 3.21 | 0.69 |
Protein Annotations
| Gene3D:3.40.47.10 | MapMan:50.2.3 | EntrezGene:8064807 | UniProt:A0A1Z5RIL0 | InterPro:Chalcone/stilbene_synth_C | InterPro:Chalcone/stilbene_synthase_N |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016740 |
| GO:GO:0016746 | GO:GO:0016747 | InterPro:IPR016039 | EnsemblPlants:OQU83574 | ProteinID:OQU83574 | ProteinID:OQU83574.1 |
| PFAM:PF00195 | PFAM:PF02797 | PIRSF:PIRSF000451 | PANTHER:PTHR11877 | PANTHER:PTHR11877:SF29 | InterPro:Polyketide_synthase_type-III |
| EnsemblPlantsGene:SORBI_3005G135000 | SUPFAM:SSF53901 | InterPro:Thiolase-like | UniParc:UPI0001A866E0 | RefSeq:XP_002450864.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr5:-:58387639..58389281
Molecular Weight (calculated)
42685.0 Da
IEP (calculated)
6.286
GRAVY (calculated)
-0.005
Length
405 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATHGPASI PQDQESRPSP AQRPNDAFAA VLGIGTANPA NCLRQDEYAD WYFRVTKSDH LTTLNNKLKR ICEKSGIKKR HFHFTAQTTA DHPEFLDRRG
101: VPSLDGRLGI TQDAVPELAA AAAARAIAEW GRPATDITHL VVTTNSGAHA PGADLRLAAL LGLRPTVQRT LLYLHGCFGG CSALRVAKDL AENNRGARVL
201: VASSEVSTLL AFGGPDEDHL DALLATALFG DGAGAAVIGV GDGDPTPVER PIFYMVSASQ ATLPGTERAL YMQLGRSGLD LGISAEVPAL LRGTIKGCVA
301: DMLAPLGLPV VPGAGWNGVF WAVHPGGRAI LDSCEAALGL EAGKLAASRH VLSEYGNMLG STIFFVLDEV RRRRQEGDCE WGLTLGIGPG VTVEMMVLQS
401: ASSQD
101: VPSLDGRLGI TQDAVPELAA AAAARAIAEW GRPATDITHL VVTTNSGAHA PGADLRLAAL LGLRPTVQRT LLYLHGCFGG CSALRVAKDL AENNRGARVL
201: VASSEVSTLL AFGGPDEDHL DALLATALFG DGAGAAVIGV GDGDPTPVER PIFYMVSASQ ATLPGTERAL YMQLGRSGLD LGISAEVPAL LRGTIKGCVA
301: DMLAPLGLPV VPGAGWNGVF WAVHPGGRAI LDSCEAALGL EAGKLAASRH VLSEYGNMLG STIFFVLDEV RRRRQEGDCE WGLTLGIGPG VTVEMMVLQS
401: ASSQD
001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
Arabidopsis Description
PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.