CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER99996
KXG26308

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G34850.1	EER99996	AT1G62940.1	23632852
AT4G34850.1	KXG26308	AT1G62940.1	23632852

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019478_P001	Maize	cytosol	94.5	94.72
Os07t0411300-00	Rice	cytosol	85.89	88.64
TraesCS5A01G002900.1	Wheat	cytosol	82.54	81.75
TraesCS5B01G003100.1	Wheat	cytosol	81.82	81.62
TraesCS5D01G003600.1	Wheat	cytosol	82.06	81.47
HORVU5Hr1G000690.2	Barley	cytosol, peroxisome	82.3	75.27
KRH29108	Soybean	cytosol	66.51	71.83
PGSC0003DMT400004133	Potato	cytosol	64.35	70.79
Solyc01g111070.2.1	Tomato	cytosol	64.59	70.5
VIT_03s0038g01460.t01	Wine grape	cytosol	65.79	70.15
CDX69091	Canola	cytosol	65.79	70.15
Bra017681.1-P	Field mustard	cytosol	65.55	69.9
CDX75466	Canola	cytosol	65.55	69.9
CDY40656	Canola	cytosol	65.55	69.9
Bra011566.1-P	Field mustard	cytosol	65.31	69.64
Bra034658.1-P	Field mustard	cytosol	65.07	69.39
CDY34811	Canola	cytosol	65.07	69.39
AT4G34850.1	Thale cress	cytosol	64.83	69.13
CDX72506	Canola	cytosol	64.83	69.13
CDY17490	Canola	cytosol	64.59	68.88
CDY58814	Canola	cytosol	64.59	68.88
KRH24136	Soybean	cytosol	60.29	66.84
EER91459	Sorghum	cytosol	49.28	42.47
OQU85107	Sorghum	cytosol	37.32	39.1
KXG36274	Sorghum	cytosol	37.08	39.04
EES14634	Sorghum	cytosol	37.08	38.94
EES09862	Sorghum	cytosol	37.32	38.9
EES09859	Sorghum	cytosol	37.08	38.65
KXG29016	Sorghum	cytosol	37.08	38.65
EES08604	Sorghum	cytosol	37.08	38.65
EES09858	Sorghum	cytosol	37.08	38.65
EES09860	Sorghum	cytosol	37.08	38.65
EES09865	Sorghum	cytosol	37.08	38.65
EES09863	Sorghum	cytosol	37.08	38.65
OQU85124	Sorghum	cytosol	36.84	38.6
EER99418	Sorghum	cytosol	36.84	38.5
EES15184	Sorghum	cytosol	37.56	38.29
OQU83574	Sorghum	cytosol	37.08	38.27
EES09864	Sorghum	cytosol	36.6	38.25
KXG28549	Sorghum	cytosol	23.45	38.13
EER99419	Sorghum	cytosol	36.84	38.12
EES15677	Sorghum	cytosol	36.84	38.02
EES09995	Sorghum	cytosol	36.12	37.38
EES08732	Sorghum	cytosol	36.12	37.38
EES08596	Sorghum	cytosol	36.36	37.16
EES09649	Sorghum	cytosol	35.41	36.82
OQU83321	Sorghum	cytosol	35.89	36.67
GSMUA_Achr5P17860_001	Banana	cytosol, nucleus, peroxisome	65.55	36.44
EES08602	Sorghum	cytosol, mitochondrion	34.45	35.56
EES08598	Sorghum	cytosol	34.21	35.4
EES08603	Sorghum	cytosol, mitochondrion	35.17	35.08
OQU83561	Sorghum	cytosol	26.79	34.89
KXG28978	Sorghum	cytosol	26.08	34.71
OQU86627	Sorghum	mitochondrion	30.62	34.41
EES15556	Sorghum	cytosol, mitochondrion	31.1	34.12
EER95816	Sorghum	cytosol	34.69	33.72
OQU83573	Sorghum	cytosol	28.47	33.62
KXG28544	Sorghum	cytosol	29.43	32.89

Protein Annotations

MapMan:21.8.1.4	Gene3D:3.40.47.10	EntrezGene:8057334	UniProt:C5X4D3	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N
EnsemblPlants:EER98407	ProteinID:EER98407	ProteinID:EER98407.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009653	GO:GO:0009987	GO:GO:0010584	GO:GO:0016043
GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	GO:GO:0019748	GO:GO:0030639	GO:GO:0080110
GO:GO:0090439	InterPro:IPR016039	PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877
PANTHER:PTHR11877:SF31	InterPro:Polyketide_synthase_type-III	EnsemblPlantsGene:SORBI_3002G115700	SUPFAM:SSF53901	InterPro:Thiolase-like	UniParc:UPI0001A8402D
RefSeq:XP_002461886.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:14235462..14236989

Molecular Weight (calculated)

44930.0 Da

IEP (calculated)

5.872

GRAVY (calculated)

-0.123

Length

418 amino acids

Sequence
(BLAST)

001: MVSSAMDTTA SSKHASSMLA PNPGKATILA LGHAFPQQLV MQDYVVDGFM KNTNCDDPEL KEKLTRLCKT TTVKTRYVVM SEEILKNYPE LAQEGLPTMK
101: QRLDISNAAV TQMATEASLS CVRSWGGALS SITHLVYVSS SEARFPGGDL HLARALGLSP DVRRVMLAFT GCSGGVAGLR VAKGLAESCG PGARVLLATS
201: ETTIVGFRPP SPDRPYDLVG VALFGDGAGA AVIGTDPAPG ERPLFELHSA LQRFLPDTEK TIEGRLTEEG IKFQLGRELP HIIEAHVEDF CHKLMKEREE
301: VGDDDRGPEL SYGDMFWAVH PGGPAILTKM EGRLGLGADK LRASRCALRD FGNASSNTIV YVLENMVEET RRRKLLAAPA GDGEDCEWGL ILAFGPGITF
401: EGILARNLQA TARASAQL

Best Arabidopsis Sequence Match ( AT4G34850.1 )
(BLAST)

001: MGSIDAAVLG SEKKSNPGKA TILALGKAFP HQLVMQEYLV DGYFKTTKCD DPELKQKLTR LCKTTTVKTR YVVMSEEILK KYPELAIEGG STVTQRLDIC
101: NDAVTEMAVE ASRACIKNWG RSISDITHVV YVSSSEARLP GGDLYLAKGL GLSPDTHRVL LYFVGCSGGV AGLRVAKDIA ENNPGSRVLL ATSETTIIGF
201: KPPSVDRPYD LVGVALFGDG AGAMIIGSDP DPICEKPLFE LHTAIQNFLP ETEKTIDGRL TEQGINFKLS RELPQIIEDN VENFCKKLIG KAGLAHKNYN
301: QMFWAVHPGG PAILNRIEKR LNLSPEKLSP SRRALMDYGN ASSNSIVYVL EYMLEESKKV RNMNEEENEW GLILAFGPGV TFEGIIARNL DV

Arabidopsis Description

PKSBPSKB [Source:UniProtKB/TrEMBL;Acc:A0A178UTW2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.