Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU83561 | Sorghum | cytosol | 89.17 | 87.23 |
| OQU83573 | Sorghum | cytosol | 54.14 | 48.02 |
| KXG28544 | Sorghum | cytosol | 55.1 | 46.26 |
| EES08596 | Sorghum | cytosol | 54.14 | 41.56 |
| EER99419 | Sorghum | cytosol | 51.91 | 40.35 |
| OQU83574 | Sorghum | cytosol | 50.64 | 39.26 |
| EES08603 | Sorghum | cytosol, mitochondrion | 51.59 | 38.66 |
| EES08598 | Sorghum | cytosol | 49.04 | 38.12 |
| EES08602 | Sorghum | cytosol, mitochondrion | 49.04 | 38.02 |
| EES09995 | Sorghum | cytosol | 48.73 | 37.87 |
| EES08732 | Sorghum | cytosol | 48.73 | 37.87 |
| KXG36274 | Sorghum | cytosol | 47.45 | 37.53 |
| EER99418 | Sorghum | cytosol | 47.77 | 37.5 |
| OQU85124 | Sorghum | cytosol | 47.45 | 37.34 |
| OQU85107 | Sorghum | cytosol | 47.45 | 37.34 |
| EES15677 | Sorghum | cytosol | 48.09 | 37.28 |
| EES15184 | Sorghum | cytosol | 48.41 | 37.07 |
| KXG28549 | Sorghum | cytosol | 30.25 | 36.97 |
| EES15556 | Sorghum | cytosol, mitochondrion | 42.99 | 35.43 |
| EER95816 | Sorghum | cytosol | 45.86 | 33.49 |
| OQU86627 | Sorghum | mitochondrion | 39.49 | 33.33 |
| EES09863 | Sorghum | cytosol | 42.36 | 33.17 |
| EES09860 | Sorghum | cytosol | 42.04 | 32.92 |
| EES09859 | Sorghum | cytosol | 42.04 | 32.92 |
| EES08604 | Sorghum | cytosol | 42.04 | 32.92 |
| KXG29016 | Sorghum | cytosol | 42.04 | 32.92 |
| EES14634 | Sorghum | cytosol | 41.72 | 32.91 |
| EES09864 | Sorghum | cytosol | 41.72 | 32.75 |
| EES09865 | Sorghum | cytosol | 41.72 | 32.67 |
| EES09862 | Sorghum | cytosol | 41.72 | 32.67 |
| EES09858 | Sorghum | cytosol | 41.72 | 32.67 |
| EES09649 | Sorghum | cytosol | 40.76 | 31.84 |
| OQU83321 | Sorghum | cytosol | 40.13 | 30.81 |
| EER98407 | Sorghum | cytosol | 34.71 | 26.08 |
| EER91459 | Sorghum | cytosol | 38.53 | 24.95 |
| VIT_12s0059g01780.t01 | Wine grape | extracellular, mitochondrion, nucleus | 3.82 | 0.64 |
Protein Annotations
| Gene3D:3.40.47.10 | MapMan:50.2.3 | EntrezGene:8079132 | UniProt:A0A1B6PTH7 | InterPro:Chalcone/stilbene_synth_C | InterPro:Chalcone/stilbene_synthase_N |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016740 |
| GO:GO:0016746 | GO:GO:0016747 | InterPro:IPR016039 | EnsemblPlants:KXG28978 | ProteinID:KXG28978 | ProteinID:KXG28978.2 |
| PFAM:PF00195 | PFAM:PF02797 | PANTHER:PTHR11877 | PANTHER:PTHR11877:SF45 | InterPro:Polyketide_synthase_type-III | EnsemblPlantsGene:SORBI_3005G134400 |
| SUPFAM:SSF53901 | unigene:Sbi.4877 | InterPro:Thiolase-like | UniParc:UPI000B8B957C | RefSeq:XP_002451155.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr5:+:58132043..58133028
Molecular Weight (calculated)
33035.9 Da
IEP (calculated)
7.968
GRAVY (calculated)
0.135
Length
314 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVRKRYFQV SEELLELLDP AMPSIDARLE AVAAALPELA VAAAAKAIAE WGRPASDITH LVVSTSSGAQ MPGVDVRVAS LLGLSPTVRR TMIYFQACAG
101: GAGALRVAKD AAENNRGAGA RVLVVCADVL SVMAFHAPDD DEARRRPEGI VAHALFGGRG GRRTLLGPRG APRLRDGTTI PGTERFVTGD FSAAGVGYNL
201: APLEVPELVG DNIERCLATA LDPLGLPSGA GAGGWNSLFW VVHPGSSTIM NSYEKALRLE PGKLAASRRA GPTVIFVLDE VVRRRRQCEW GVLVGLGPGF
301: TAEVIALRSL ATPL
101: GAGALRVAKD AAENNRGAGA RVLVVCADVL SVMAFHAPDD DEARRRPEGI VAHALFGGRG GRRTLLGPRG APRLRDGTTI PGTERFVTGD FSAAGVGYNL
201: APLEVPELVG DNIERCLATA LDPLGLPSGA GAGGWNSLFW VVHPGSSTIM NSYEKALRLE PGKLAASRRA GPTVIFVLDE VVRRRRQCEW GVLVGLGPGF
301: TAEVIALRSL ATPL
001: MLVSARVEKQ KRVAYQGKAT VLALGKALPS NVVSQENLVE EYLREIKCDN LSIKDKLQHL CKSTTVKTRY TVMSRETLHK YPELATEGSP TIKQRLEIAN
101: DAVVQMAYEA SLVCIKEWGR AVEDITHLVY VSSSEFRLPG GDLYLSAQLG LSNEVQRVML YFLGCYGGLS GLRVAKDIAE NNPGSRVLLT TSETTVLGFR
201: PPNKARPYNL VGAALFGDGA AALIIGADPT ESESPFMELH CAMQQFLPQT QGVIDGRLSE EGITFKLGRD LPQKIEDNVE EFCKKLVAKA GSGALELNDL
301: FWAVHPGGPA ILSGLETKLK LKPEKLECSR RALMDYGNVS SNTIFYIMDK VRDELEKKGT EGEEWGLGLA FGPGITFEGF LMRNL
101: DAVVQMAYEA SLVCIKEWGR AVEDITHLVY VSSSEFRLPG GDLYLSAQLG LSNEVQRVML YFLGCYGGLS GLRVAKDIAE NNPGSRVLLT TSETTVLGFR
201: PPNKARPYNL VGAALFGDGA AALIIGADPT ESESPFMELH CAMQQFLPQT QGVIDGRLSE EGITFKLGRD LPQKIEDNVE EFCKKLVAKA GSGALELNDL
301: FWAVHPGGPA ILSGLETKLK LKPEKLECSR RALMDYGNVS SNTIFYIMDK VRDELEKKGT EGEEWGLGLA FGPGITFEGF LMRNL
Arabidopsis Description
Type III polyketide synthase C [Source:UniProtKB/Swiss-Prot;Acc:O81305]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.