CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
peroxisome 1
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES08596	Sorghum	cytosol	91.05	57.21
EES08602	Sorghum	cytosol, mitochondrion	64.59	40.99
EES08598	Sorghum	cytosol	63.81	40.59
EES08603	Sorghum	cytosol, mitochondrion	64.59	39.62
OQU83574	Sorghum	cytosol	62.26	39.51
Os11t0529800-00	Rice	cytosol, extracellular	61.48	39.4
EER99419	Sorghum	cytosol	59.53	37.87
Os11t0529500-00	Rice	cytosol	59.92	37.29
OQU86627	Sorghum	mitochondrion	51.36	35.48
EES15556	Sorghum	cytosol, mitochondrion	52.53	35.43
OQU85107	Sorghum	cytosol	54.86	35.34
OQU85124	Sorghum	cytosol	54.47	35.09
KXG36274	Sorghum	cytosol	54.09	35.01
EER99418	Sorghum	cytosol	54.47	35.0
EES08732	Sorghum	cytosol	52.92	33.66
EES09995	Sorghum	cytosol	52.92	33.66
EES15677	Sorghum	cytosol	52.92	33.58
EES14634	Sorghum	cytosol	51.36	33.17
EER95816	Sorghum	cytosol	55.25	33.02
OQU83561	Sorghum	cytosol	40.86	32.71
EES15184	Sorghum	cytosol	51.75	32.44
EES09863	Sorghum	cytosol	50.58	32.42
EES09862	Sorghum	cytosol	50.58	32.42
KXG29016	Sorghum	cytosol	50.58	32.42
EES09860	Sorghum	cytosol	50.58	32.42
EES09865	Sorghum	cytosol	50.58	32.42
EES09859	Sorghum	cytosol	50.58	32.42
EES09858	Sorghum	cytosol	50.58	32.42
EES08604	Sorghum	cytosol	50.58	32.42
EES09864	Sorghum	cytosol	50.19	32.25
KXG28978	Sorghum	cytosol	36.97	30.25
KXG28544	Sorghum	cytosol	42.8	29.41
OQU83573	Sorghum	cytosol	39.3	28.53
OQU83321	Sorghum	cytosol	38.13	23.96
EES09649	Sorghum	cytosol	37.35	23.88
EER98407	Sorghum	cytosol	38.13	23.45
EER91459	Sorghum	cytosol	37.74	20.0
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.11	0.42

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	UniProt:A0A1B6PSA0	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016747	InterPro:IPR016039
EnsemblPlants:KXG28549	ProteinID:KXG28549	ProteinID:KXG28549.1	PFAM:PF00195	PANTHER:PTHR11877	PANTHER:PTHR11877:SF29
InterPro:Polyketide_synthase_type-III	EnsemblPlantsGene:SORBI_3005G135600	SUPFAM:SSF53901	InterPro:Thiolase-like	UniParc:UPI00081AD885	SEG:seg

Description

hypothetical protein

Coordinates

chr5:+:58502994..58504604

Molecular Weight (calculated)

27421.1 Da

IEP (calculated)

7.894

GRAVY (calculated)

0.189

Length

257 amino acids

Sequence
(BLAST)

001: MATIAQQVTL LEDLRRAQRA NGPAAVLAIG TATPANCVLQ DHFPDWYFRV TRCDHLTKLK SKMTRICDKS GTKKRYFHHT EETIGWHPEF LDRALPSLGA
101: RLRTTADAAA ELAAAAAGAA IAEWGRPAVD ITHLVVATNS GADEPGADLR LALLLGLGPT VRRTLLYLHG CSAGLVAIRV ARDIAENNRS ARVLVACAHA
201: VLLTFGAPDE ARLDALVTSA LFADGAGAVV VGADPVLPLE RPVFHLDYVL KAHSCVV

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.