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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 1
  • cytosol 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES08602 Sorghum cytosol, mitochondrion 99.26 99.01
EES08603 Sorghum cytosol, mitochondrion 84.16 81.15
EES08596 Sorghum cytosol 66.58 65.77
KXG28549 Sorghum cytosol 40.59 63.81
OQU83574 Sorghum cytosol 61.14 60.99
Os11t0529800-00 Rice cytosol, extracellular 60.15 60.6
Os11t0529500-00 Rice cytosol 58.66 57.38
KXG36274 Sorghum cytosol 51.98 52.9
EER99419 Sorghum cytosol 52.72 52.72
OQU85107 Sorghum cytosol 51.73 52.38
EER99418 Sorghum cytosol 51.73 52.25
OQU85124 Sorghum cytosol 51.49 52.13
EES08732 Sorghum cytosol 51.49 51.49
EES09995 Sorghum cytosol 51.49 51.49
EES15184 Sorghum cytosol 51.73 50.98
EES15556 Sorghum cytosol, mitochondrion 48.02 50.92
EES15677 Sorghum cytosol 50.74 50.62
OQU86627 Sorghum mitochondrion 45.79 49.73
KXG28978 Sorghum cytosol 38.12 49.04
OQU83561 Sorghum cytosol 38.86 48.91
EER95816 Sorghum cytosol 51.73 48.6
KXG28544 Sorghum cytosol 44.06 47.59
OQU83573 Sorghum cytosol 41.58 47.46
EES14634 Sorghum cytosol 45.79 46.48
KXG29016 Sorghum cytosol 45.54 45.89
EES09863 Sorghum cytosol 45.54 45.89
EES09860 Sorghum cytosol 45.54 45.89
EES09859 Sorghum cytosol 45.54 45.89
EES08604 Sorghum cytosol 45.54 45.89
EES09865 Sorghum cytosol 45.3 45.64
EES09862 Sorghum cytosol 45.3 45.64
EES09858 Sorghum cytosol 45.3 45.64
EES09864 Sorghum cytosol 44.8 45.25
Zm00001d052675_P002 Maize plastid 78.22 42.88
EES09649 Sorghum cytosol 38.12 38.31
OQU83321 Sorghum cytosol 38.61 38.14
EER98407 Sorghum cytosol 35.4 34.21
EER91459 Sorghum cytosol 34.16 28.45
VIT_12s0059g01780.t01 Wine grape extracellular, mitochondrion, nucleus 2.97 0.64
Protein Annotations
Gene3D:3.40.47.10MapMan:50.2.3EntrezGene:8064811UniProt:C5Y3E6InterPro:Chalcone/stilbene_synth_CInterPro:Chalcone/stilbene_synthase_N
EnsemblPlants:EES08598ProteinID:EES08598ProteinID:EES08598.1GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0016740GO:GO:0016746GO:GO:0016747InterPro:IPR016039
PFAM:PF00195PFAM:PF02797PIRSF:PIRSF000451PANTHER:PTHR11877PANTHER:PTHR11877:SF29InterPro:Polyketide_synthase_type-III
EnsemblPlantsGene:SORBI_3005G135500SUPFAM:SSF53901InterPro:Thiolase-likeUniParc:UPI0001A8645CRefSeq:XP_002449610.1SEG:seg
Description
hypothetical protein
Coordinates
chr5:+:58445958..58447417
Molecular Weight (calculated)
43468.3 Da
IEP (calculated)
6.985
GRAVY (calculated)
-0.044
Length
404 amino acids
Sequence
(BLAST)
001: MGSSPHLATV LHDIHQRQRA DGPAAMLGIG TANPTNCVLQ DQFADWFFHV TKSDHLAEST AKMKKICERS GIKKRYFYHT EEIIGAHPEL IDRVLPSLTT
101: RLSIIADAAP KLAAEAASRA IADWGRPAAD ITHLVVATNS GANEPGADVR LAGLLGLRPT VRRTLLYLHG CSAGLAALRM AKDIAENNRG ARVLVACTQA
201: KILWFCPPND AHLDLMVAMT MLADGAGAVV VGADDPANHI ERPIFHMVSA SQTTLPGTEQ AVVDNLRENG LVDSHLSVEV PRLLRGSISK CLADSMAPLG
301: LLTASDKGWN GFFWALHPGG RAILDSYEAA LGLEPGKLAA SRHVLSEYGN MMGTAIIFVL DEIRRRRRRH DDGKDCQWGV MSGLGPGLTI ETIVLHATGS
401: QDEN
Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)
001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
Arabidopsis Description
PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.