Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- mitochondrion 2
- cytosol 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU85124 | Sorghum | cytosol | 98.75 | 98.75 |
| KXG36274 | Sorghum | cytosol | 90.73 | 91.18 |
| EER99418 | Sorghum | cytosol | 90.98 | 90.75 |
| EES08732 | Sorghum | cytosol | 86.72 | 85.64 |
| EES09995 | Sorghum | cytosol | 86.72 | 85.64 |
| EES15677 | Sorghum | cytosol | 84.46 | 83.21 |
| TraesCS5A01G379400.1 | Wheat | mitochondrion | 71.68 | 74.67 |
| TraesCS5A01G379500.1 | Wheat | cytosol, mitochondrion | 72.18 | 74.04 |
| TraesCS1D01G359600.1 | Wheat | cytosol | 72.68 | 73.6 |
| TraesCS5B01G383300.1 | Wheat | cytosol, mitochondrion | 70.68 | 72.49 |
| TraesCS5A01G379600.1 | Wheat | cytosol | 62.16 | 71.88 |
| Os07t0501100-01 | Rice | cytosol | 70.18 | 69.14 |
| HORVU5Hr1G093950.1 | Barley | cytosol | 64.66 | 64.02 |
| EES15184 | Sorghum | cytosol | 63.66 | 61.95 |
| EER99419 | Sorghum | cytosol | 59.9 | 59.16 |
| OQU83574 | Sorghum | cytosol | 57.64 | 56.79 |
| KXG28549 | Sorghum | cytosol | 35.34 | 54.86 |
| EES08596 | Sorghum | cytosol | 55.14 | 53.79 |
| EES14634 | Sorghum | cytosol | 52.63 | 52.76 |
| EES09863 | Sorghum | cytosol | 52.88 | 52.62 |
| EES08602 | Sorghum | cytosol, mitochondrion | 53.13 | 52.35 |
| EES09864 | Sorghum | cytosol | 52.38 | 52.25 |
| EES09865 | Sorghum | cytosol | 52.38 | 52.12 |
| EES09860 | Sorghum | cytosol | 52.38 | 52.12 |
| EES09859 | Sorghum | cytosol | 52.38 | 52.12 |
| EES09858 | Sorghum | cytosol | 52.38 | 52.12 |
| EES08604 | Sorghum | cytosol | 52.38 | 52.12 |
| KXG29016 | Sorghum | cytosol | 52.38 | 52.12 |
| EES09862 | Sorghum | cytosol | 52.13 | 51.87 |
| EES08598 | Sorghum | cytosol | 52.38 | 51.73 |
| EER95816 | Sorghum | cytosol | 55.64 | 51.63 |
| EES08603 | Sorghum | cytosol, mitochondrion | 53.13 | 50.6 |
| OQU83573 | Sorghum | cytosol | 43.36 | 48.87 |
| EES15556 | Sorghum | cytosol, mitochondrion | 46.37 | 48.56 |
| OQU86627 | Sorghum | mitochondrion | 44.86 | 48.12 |
| OQU83561 | Sorghum | cytosol | 38.35 | 47.66 |
| KXG28978 | Sorghum | cytosol | 37.34 | 47.45 |
| KXG28544 | Sorghum | cytosol | 43.61 | 46.52 |
| EES09649 | Sorghum | cytosol | 44.11 | 43.78 |
| OQU83321 | Sorghum | cytosol | 42.11 | 41.08 |
| EER98407 | Sorghum | cytosol | 39.1 | 37.32 |
| EER91459 | Sorghum | cytosol | 36.09 | 29.69 |
| VIT_12s0059g01780.t01 | Wine grape | extracellular, mitochondrion, nucleus | 4.26 | 0.9 |
Protein Annotations
| Gene3D:3.40.47.10 | MapMan:50.2.3 | EntrezGene:8068873 | UniProt:A0A1Z5RN50 | InterPro:Chalcone/stilbene_synth_C | InterPro:Chalcone/stilbene_synthase_N |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016740 |
| GO:GO:0016746 | GO:GO:0016747 | InterPro:IPR016039 | EnsemblPlants:OQU85107 | ProteinID:OQU85107 | ProteinID:OQU85107.1 |
| PFAM:PF00195 | PFAM:PF02797 | PIRSF:PIRSF000451 | PANTHER:PTHR11877 | PANTHER:PTHR11877:SF34 | InterPro:Polyketide_synthase_type-III |
| EnsemblPlantsGene:SORBI_3004G175800 | SUPFAM:SSF53901 | InterPro:Thiolase-like | UniParc:UPI0001A857DD | RefSeq:XP_002452260.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr4:+:52804496..52806078
Molecular Weight (calculated)
42534.9 Da
IEP (calculated)
6.053
GRAVY (calculated)
-0.026
Length
399 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSAPATAQE MRRAQRADGP AAVLGIGTAN PPTCLAQDDY PDYYFRVTNS EHLTDLKGKL TRICNKSGIK QRYIHLNEDL LAANPDFADR TRPSLDARVD
101: IASAAVPELA AAAAAKAIAE WGRPATDITH LVFSTYSGAR APSADRRLAS LLGLRPTVSR TILNLHGCYG GGRSLQLAKE LAENNRGARV LVACSEITLI
201: AFYGPEGGCA DNILGQALFG DGAGAVIVGA DPVAPVERPL FEMAFASQTT IPETEDAISM QINKGGMEYH ISNQVPRLLG CNVERCLVDA FRALGVSAAW
301: NDLFWAIHPG GRAILDHIEG VLGLDDSKLA ASRHVLSEFG NMSGTTVIFV LDELRRRRAA MAMQGGEAPE WGVMMAFGPG ITIETMVLHA PSNLDLKGN
101: IASAAVPELA AAAAAKAIAE WGRPATDITH LVFSTYSGAR APSADRRLAS LLGLRPTVSR TILNLHGCYG GGRSLQLAKE LAENNRGARV LVACSEITLI
201: AFYGPEGGCA DNILGQALFG DGAGAVIVGA DPVAPVERPL FEMAFASQTT IPETEDAISM QINKGGMEYH ISNQVPRLLG CNVERCLVDA FRALGVSAAW
301: NDLFWAIHPG GRAILDHIEG VLGLDDSKLA ASRHVLSEFG NMSGTTVIFV LDELRRRRAA MAMQGGEAPE WGVMMAFGPG ITIETMVLHA PSNLDLKGN
001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
Arabidopsis Description
PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.