CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021562_P001	Maize	cytosol, mitochondrion	92.82	93.28
Zm00001d000438_P001	Maize	cytosol, mitochondrion	92.82	93.28
TraesCS6B01G327900.1	Wheat	cytosol	65.84	79.64
TraesCS6D01G278200.1	Wheat	cytosol	78.71	79.3
TraesCS6A01G298400.1	Wheat	cytosol	78.47	79.05
HORVU6Hr1G074060.2	Barley	cytosol	77.48	77.67
Os07t0271500-01	Rice	cytosol	70.54	70.9
OQU85124	Sorghum	cytosol	59.16	59.9
OQU85107	Sorghum	cytosol	59.16	59.9
KXG28549	Sorghum	cytosol	37.87	59.53
KXG36274	Sorghum	cytosol	58.42	59.45
EER99418	Sorghum	cytosol	58.66	59.25
EES09995	Sorghum	cytosol	58.91	58.91
EES08732	Sorghum	cytosol	58.91	58.91
EES08596	Sorghum	cytosol	58.42	57.7
EES15677	Sorghum	cytosol	57.43	57.28
EES15184	Sorghum	cytosol	56.19	55.37
EER95816	Sorghum	cytosol	58.17	54.65
OQU83574	Sorghum	cytosol	54.7	54.57
EES14634	Sorghum	cytosol	53.22	54.02
EES09864	Sorghum	cytosol	53.47	54.0
EES09863	Sorghum	cytosol	53.47	53.87
EES09858	Sorghum	cytosol	53.47	53.87
EES09865	Sorghum	cytosol	53.47	53.87
EES09862	Sorghum	cytosol	53.22	53.62
EES09860	Sorghum	cytosol	53.22	53.62
EES08604	Sorghum	cytosol	53.22	53.62
KXG29016	Sorghum	cytosol	53.22	53.62
EES09859	Sorghum	cytosol	53.22	53.62
EES08602	Sorghum	cytosol, mitochondrion	53.22	53.09
EES08598	Sorghum	cytosol	52.72	52.72
OQU83561	Sorghum	cytosol	41.83	52.65
EES15556	Sorghum	cytosol, mitochondrion	49.51	52.49
KXG28978	Sorghum	cytosol	40.35	51.91
EES08603	Sorghum	cytosol, mitochondrion	53.71	51.79
OQU86627	Sorghum	mitochondrion	46.53	50.54
KXG28544	Sorghum	cytosol	44.55	48.13
OQU83573	Sorghum	cytosol	41.83	47.74
EES09649	Sorghum	cytosol	43.32	43.53
OQU83321	Sorghum	cytosol	38.12	37.65
EER98407	Sorghum	cytosol	38.12	36.84
EER91459	Sorghum	cytosol	38.12	31.75
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.47	0.74

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	EntrezGene:8080716	UniProt:C5X9A8	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N
EnsemblPlants:EER99419	ProteinID:EER99419	ProteinID:EER99419.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009813	GO:GO:0016740
GO:GO:0016746	GO:GO:0016747	GO:GO:0042802	InterPro:IPR016039	PFAM:PF00195	PFAM:PF02797
PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF45	InterPro:Polyketide_synthase_type-III	EnsemblPlantsGene:SORBI_3002G310600	SUPFAM:SSF53901
unigene:Sbi.2126	InterPro:Thiolase-like	UniParc:UPI0001A83FF6	RefSeq:XP_002462898.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:-:68447933..68449668

Molecular Weight (calculated)

43417.2 Da

IEP (calculated)

5.828

GRAVY (calculated)

0.029

Length

404 amino acids

Sequence
(BLAST)

001: MGSSAAPANV REICRAQRAD GPAAVLAIGT ANPANCVPQD EFPDFYFRAT KSDHLTGLKE KFKRVCQKLG VQKRYLHHTE ELLSAHPEFL DHSSPSLDAR
101: LDIVKTAVPE LAAQASRKAI AEWGRPAADI THLVVTTNSG AHIPGVDFRL VPLLGLRPTV RRTMLYLNGC FAGAAALRLA RDLAENNSGA RVLVVCAEIT
201: VLLFNGPEEG CFQTLVNQGL FGDGAGAVIV GADPLAAERP LFEIVSAAQA IIPESEDVIT MHLTRGGYGG NISTRQVPVL IGDNIERCLT DAFAPLGGVI
301: GAEWNDLFWD VHPGSSAILD QVDAVLKLKP EKLAASRRVL SEYGNMFGVT VIFVLDELRR RMEKGEEEGA PEWGVMVAFG PGLTVETMVL HRSGTPAEKK
401: LAEA

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.