CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G357700.1	Wheat	mitochondrion	43.17	74.68
TraesCS2B01G041300.1	Wheat	cytosol	70.24	74.61
TraesCS4B01G357600.1	Wheat	mitochondrion	43.9	74.38
TraesCS2D01G030600.1	Wheat	mitochondrion	69.51	73.83
TraesCS4B01G357800.1	Wheat	cytosol	53.41	73.49
TraesCS4D01G351300.1	Wheat	mitochondrion	68.78	70.85
TraesCS4B01G357100.1	Wheat	mitochondrion	56.59	70.52
TraesCS5A01G526900.1	Wheat	cytosol, mitochondrion	68.05	69.92
Os10t0158400-00	Rice	cytosol	66.83	68.84
TraesCS6A01G015300.1	Wheat	cytosol	67.56	68.73
Os10t0177300-00	Rice	cytosol, mitochondrion, peroxisome	52.93	68.45
Os05t0212900-00	Rice	cytosol	65.37	68.37
TraesCS6A01G015500.1	Wheat	cytosol, plastid	67.8	68.14
HORVU6Hr1G003020.2	Barley	cytosol	68.29	67.8
TraesCS6B01G022300.1	Wheat	cytosol	65.85	67.16
TraesCS6B01G022500.1	Wheat	cytosol	67.07	66.91
Os10t0167900-00	Rice	cytosol	64.63	66.42
Os10t0168500-00	Rice	cytosol, peroxisome, plastid	42.2	65.28
Os10t0162856-00	Rice	cytosol	68.54	64.9
KXG36274	Sorghum	cytosol	61.71	63.73
OQU85107	Sorghum	cytosol	61.95	63.66
EER99418	Sorghum	cytosol	61.95	63.5
OQU85124	Sorghum	cytosol	61.71	63.41
TraesCS6D01G018500.1	Wheat	plastid	67.07	62.79
Os05t0213100-00	Rice	cytosol, peroxisome, plastid	65.37	62.76
Os05t0212600-00	Rice	cytosol	45.85	62.25
EES08732	Sorghum	cytosol	61.22	62.13
EES09995	Sorghum	cytosol	61.22	62.13
EES15677	Sorghum	cytosol	59.76	60.49
Zm00001d016014_P001	Maize	cytosol, endoplasmic reticulum, mitochondrion	58.05	59.95
EER99419	Sorghum	cytosol	55.37	56.19
OQU83574	Sorghum	cytosol	52.44	53.09
EES08602	Sorghum	cytosol, mitochondrion	51.46	52.1
KXG28549	Sorghum	cytosol	32.44	51.75
EES08598	Sorghum	cytosol	50.98	51.73
EES08603	Sorghum	cytosol, mitochondrion	52.68	51.55
EES08596	Sorghum	cytosol	50.49	50.61
OQU83561	Sorghum	cytosol	39.51	50.47
OQU86627	Sorghum	mitochondrion	44.88	49.46
EES15556	Sorghum	cytosol, mitochondrion	45.85	49.34
OQU83573	Sorghum	cytosol	42.2	48.87
KXG28978	Sorghum	cytosol	37.07	48.41
EES09863	Sorghum	cytosol	47.32	48.38
EES09860	Sorghum	cytosol	47.07	48.13
EES09859	Sorghum	cytosol	47.07	48.13
EES08604	Sorghum	cytosol	47.07	48.13
KXG29016	Sorghum	cytosol	47.07	48.13
EES14634	Sorghum	cytosol	46.59	47.99
EES09858	Sorghum	cytosol	46.83	47.88
EES09862	Sorghum	cytosol	46.83	47.88
EES09865	Sorghum	cytosol	46.83	47.88
EES09864	Sorghum	cytosol	46.59	47.75
EER95816	Sorghum	cytosol	50.0	47.67
KXG28544	Sorghum	cytosol	42.44	46.52
EES09649	Sorghum	cytosol	41.46	42.29
OQU83321	Sorghum	cytosol	40.24	40.34
EER98407	Sorghum	cytosol	38.29	37.56
EER91459	Sorghum	cytosol	35.85	30.31
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	2.44	0.53

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	EntrezGene:8057988	UniProt:C5YN83	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N
EnsemblPlants:EES15184	ProteinID:EES15184	ProteinID:EES15184.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039
PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF23	InterPro:Polyketide_synthase_type-III
EnsemblPlantsGene:SORBI_3007G170400	SUPFAM:SSF53901	InterPro:Thiolase-like	UniParc:UPI0001A87D78	RefSeq:XP_002445689.1	SEG:seg

Description

hypothetical protein

Coordinates

chr7:-:60522434..60524808

Molecular Weight (calculated)

44565.5 Da

IEP (calculated)

5.885

GRAVY (calculated)

-0.107

Length

410 amino acids

Sequence
(BLAST)

001: MIRAQGAAMH ESRSMQHSEG PAAVLAIATA NPSGTILSQD EFADQFFRIA KSDQLIGLKE KLKKICHKTG IEKRHFHLNE EILRAHPEFL DRALPSLDAR
101: IDIVATEVPK LAESASVKAI AEWGRPATDI THLVFSTYSG YRAPSADLRL ASLLGLRTSV CRTILSLHGC YGGARALHLA KELAENNRGA RVLVACSEIT
201: LVCFTGPDGS NLVGHALFGD GAGAVIVGAG PLAAGERPVF EMVSATQTTI PETEYALGMQ VSEGGLDFHL AIQVPMLLGQ NVEQCLRDAF RSAAALVGDD
301: DDGDVEVTWN DLFWAVHPGG RPILDKIEDV LQLEPGKLEA SRQVLREYGN MSGATIVFVL DELRRRRRRR REEEGDHDHQ LPELGVMMAF GPGITIETMV
401: LRIPSDPKGN

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.