Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G357600.1 | Wheat | mitochondrion | 99.58 | 97.52 |
| TraesCS4B01G357800.1 | Wheat | cytosol | 99.16 | 78.86 |
| TraesCS4D01G351300.1 | Wheat | mitochondrion | 93.67 | 55.78 |
| TraesCS5A01G526900.1 | Wheat | cytosol, mitochondrion | 93.67 | 55.64 |
| TraesCS4B01G357100.1 | Wheat | mitochondrion | 68.78 | 49.54 |
| Os10t0177300-00 | Rice | cytosol, mitochondrion, peroxisome | 64.98 | 48.58 |
| TraesCS6B01G022300.1 | Wheat | cytosol | 81.86 | 48.26 |
| TraesCS6B01G022500.1 | Wheat | cytosol | 82.28 | 47.45 |
| TraesCS2B01G041300.1 | Wheat | cytosol | 75.53 | 46.37 |
| EES15184 | Sorghum | cytosol | 74.68 | 43.17 |
| Os05t0212900-00 | Rice | cytosol | 66.24 | 40.05 |
| Os10t0158400-00 | Rice | cytosol | 66.24 | 39.45 |
| Os10t0168500-00 | Rice | cytosol, peroxisome, plastid | 43.88 | 39.25 |
| Os10t0167900-00 | Rice | cytosol | 63.71 | 37.84 |
| Os10t0162856-00 | Rice | cytosol | 67.09 | 36.72 |
| Os05t0213100-00 | Rice | cytosol, peroxisome, plastid | 65.4 | 36.3 |
| TraesCS5B01G383300.1 | Wheat | cytosol, mitochondrion | 57.81 | 35.22 |
| TraesCS2B01G006800.1 | Wheat | cytosol | 51.05 | 32.53 |
| Zm00001d016014_P001 | Maize | cytosol, endoplasmic reticulum, mitochondrion | 52.32 | 31.23 |
| TraesCS2B01G006000.1 | Wheat | cytosol | 51.05 | 30.71 |
| TraesCS4B01G021600.1 | Wheat | cytosol | 51.9 | 30.67 |
| TraesCS2B01G006700.1 | Wheat | cytosol | 50.63 | 30.46 |
| TraesCS2B01G019200.1 | Wheat | cytosol | 50.21 | 29.97 |
| TraesCS2B01G072600.1 | Wheat | mitochondrion | 50.63 | 29.93 |
| TraesCS2B01G007000.1 | Wheat | cytosol | 49.79 | 29.5 |
| Os05t0212600-00 | Rice | cytosol | 37.13 | 29.14 |
| TraesCS2B01G038600.1 | Wheat | cytosol | 44.3 | 29.01 |
| TraesCS5B01G487700.1 | Wheat | cytosol | 48.1 | 28.79 |
| TraesCS2B01G048400.1 | Wheat | cytosol | 45.57 | 27.41 |
| TraesCS2B01G038700.1 | Wheat | cytosol | 44.73 | 26.9 |
| TraesCS2B01G558400.1 | Wheat | cytosol | 44.73 | 26.63 |
| TraesCS1B01G040000.1 | Wheat | cytosol, mitochondrion | 44.3 | 26.58 |
| TraesCS1B01G040300.1 | Wheat | cytosol, mitochondrion | 44.3 | 26.58 |
| TraesCS2B01G613100.1 | Wheat | cytosol | 44.73 | 26.57 |
| TraesCS2B01G006300.1 | Wheat | extracellular, golgi | 51.48 | 26.41 |
| TraesCS6B01G327900.1 | Wheat | cytosol | 37.13 | 26.35 |
| TraesCS1B01G041000.1 | Wheat | cytosol | 43.88 | 26.33 |
| TraesCS1B01G040100.1 | Wheat | cytosol | 43.88 | 26.33 |
| TraesCS1B01G040500.1 | Wheat | cytosol | 44.3 | 26.32 |
| TraesCS1B01G040200.1 | Wheat | cytosol, mitochondrion | 44.3 | 26.12 |
| TraesCS6B01G185200.2 | Wheat | cytosol, mitochondrion, plastid | 40.08 | 24.42 |
| TraesCS7B01G371700.1 | Wheat | plastid | 44.73 | 24.15 |
| TraesCS6B01G245200.1 | Wheat | mitochondrion | 34.18 | 24.11 |
| TraesCS1B01G176300.1 | Wheat | cytosol | 39.24 | 23.85 |
| TraesCS5B01G003100.1 | Wheat | cytosol | 41.77 | 23.63 |
| TraesCS7B01G462200.1 | Wheat | cytosol | 23.21 | 18.39 |
| VIT_12s0059g01780.t01 | Wine grape | extracellular, mitochondrion, nucleus | 3.38 | 0.42 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G357700.1 | EnsemblPlantsGene:TraesCS4B01G357700 | Gene3D:3.40.47.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016740 | GO:GO:0016747 | InterPro:Chalcone/stilbene_synth_C | InterPro:Chalcone/stilbene_synthase_N |
| InterPro:IPR016039 | InterPro:Polyketide_synthase_type-III | InterPro:Thiolase-like | PANTHER:PTHR11877 | PANTHER:PTHR11877:SF23 | PFAM:PF00195 |
| PFAM:PF02797 | SEG:seg | SUPFAM:SSF53901 | MapMan:50.2.3 | : | : |
Description
No Description!
Coordinates
chr4B:+:648219918..648220631
Molecular Weight (calculated)
24950.2 Da
IEP (calculated)
5.269
GRAVY (calculated)
0.138
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSLHGCYGG GRALSLAKEL AENNRGARVL VACSEMTLVC FGAPDGGNIV GHALFGDGAG AVVVGAGPFL NGEQGPIFEM VSATQTTIPR TEHALGMRVS
101: GGGIDFHLAI QVPTLVGQSV EPCLLDAFRG IIVDDDDAPP PCSGNGNGNG RWNDLFWAVH PGGRPILDNI DKVLMLEPEK LAASRHVLRE YGNMSGATIV
201: FVLDELRRGR SPLPEWGALL AFGPGITIEA MVLRCPR
101: GGGIDFHLAI QVPTLVGQSV EPCLLDAFRG IIVDDDDAPP PCSGNGNGNG RWNDLFWAVH PGGRPILDNI DKVLMLEPEK LAASRHVLRE YGNMSGATIV
201: FVLDELRRGR SPLPEWGALL AFGPGITIEA MVLRCPR
001: MLVSARVEKQ KRVAYQGKAT VLALGKALPS NVVSQENLVE EYLREIKCDN LSIKDKLQHL CKSTTVKTRY TVMSRETLHK YPELATEGSP TIKQRLEIAN
101: DAVVQMAYEA SLVCIKEWGR AVEDITHLVY VSSSEFRLPG GDLYLSAQLG LSNEVQRVML YFLGCYGGLS GLRVAKDIAE NNPGSRVLLT TSETTVLGFR
201: PPNKARPYNL VGAALFGDGA AALIIGADPT ESESPFMELH CAMQQFLPQT QGVIDGRLSE EGITFKLGRD LPQKIEDNVE EFCKKLVAKA GSGALELNDL
301: FWAVHPGGPA ILSGLETKLK LKPEKLECSR RALMDYGNVS SNTIFYIMDK VRDELEKKGT EGEEWGLGLA FGPGITFEGF LMRNL
101: DAVVQMAYEA SLVCIKEWGR AVEDITHLVY VSSSEFRLPG GDLYLSAQLG LSNEVQRVML YFLGCYGGLS GLRVAKDIAE NNPGSRVLLT TSETTVLGFR
201: PPNKARPYNL VGAALFGDGA AALIIGADPT ESESPFMELH CAMQQFLPQT QGVIDGRLSE EGITFKLGRD LPQKIEDNVE EFCKKLVAKA GSGALELNDL
301: FWAVHPGGPA ILSGLETKLK LKPEKLECSR RALMDYGNVS SNTIFYIMDK VRDELEKKGT EGEEWGLGLA FGPGITFEGF LMRNL
Arabidopsis Description
Type III polyketide synthase C [Source:UniProtKB/Swiss-Prot;Acc:O81305]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.