Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- peroxisome 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G007000.1 | Wheat | cytosol | 60.82 | 66.75 |
| TraesCS2B01G072600.1 | Wheat | mitochondrion | 60.14 | 65.84 |
| TraesCS2B01G019200.1 | Wheat | cytosol | 55.13 | 60.96 |
| Os07t0525900-00 | Rice | cytosol | 53.99 | 59.55 |
| Os07t0526400-01 | Rice | cytosol | 53.76 | 59.15 |
| TraesCS2B01G006000.1 | Wheat | cytosol | 53.08 | 59.14 |
| TraesCS2B01G006700.1 | Wheat | cytosol | 52.16 | 58.12 |
| TraesCS2B01G006800.1 | Wheat | cytosol | 49.2 | 58.06 |
| TraesCS5B01G487700.1 | Wheat | cytosol | 48.97 | 54.29 |
| TraesCS6B01G327900.1 | Wheat | cytosol | 40.55 | 53.29 |
| TraesCS5B01G383300.1 | Wheat | cytosol, mitochondrion | 46.92 | 52.96 |
| Os07t0525500-00 | Rice | plastid | 47.15 | 52.94 |
| TraesCS4B01G021600.1 | Wheat | cytosol | 47.84 | 52.37 |
| TraesCS2B01G006300.1 | Wheat | extracellular, golgi | 54.44 | 51.73 |
| TraesCS6B01G245200.1 | Wheat | mitochondrion | 38.72 | 50.6 |
| TraesCS2B01G041300.1 | Wheat | cytosol | 44.19 | 50.26 |
| TraesCS4B01G357800.1 | Wheat | cytosol | 32.35 | 47.65 |
| TraesCS2B01G038600.1 | Wheat | cytosol | 37.36 | 45.3 |
| TraesCS6B01G022300.1 | Wheat | cytosol | 41.46 | 45.27 |
| TraesCS2B01G613100.1 | Wheat | cytosol | 40.77 | 44.86 |
| TraesCS4B01G357700.1 | Wheat | mitochondrion | 24.15 | 44.73 |
| TraesCS4B01G357600.1 | Wheat | mitochondrion | 24.6 | 44.63 |
| TraesCS2B01G038700.1 | Wheat | cytosol | 39.64 | 44.16 |
| TraesCS6B01G022500.1 | Wheat | cytosol | 41.23 | 44.04 |
| TraesCS2B01G048400.1 | Wheat | cytosol | 39.18 | 43.65 |
| TraesCS1B01G041000.1 | Wheat | cytosol | 39.18 | 43.54 |
| TraesCS1B01G040000.1 | Wheat | cytosol, mitochondrion | 38.95 | 43.29 |
| TraesCS2B01G558400.1 | Wheat | cytosol | 39.18 | 43.22 |
| TraesCS1B01G040500.1 | Wheat | cytosol | 39.18 | 43.11 |
| TraesCS1B01G040300.1 | Wheat | cytosol, mitochondrion | 38.72 | 43.04 |
| TraesCS1B01G040100.1 | Wheat | cytosol | 38.72 | 43.04 |
| TraesCS4B01G357100.1 | Wheat | mitochondrion | 31.89 | 42.55 |
| TraesCS1B01G040200.1 | Wheat | cytosol, mitochondrion | 38.95 | 42.54 |
| TraesCS7B01G462200.1 | Wheat | cytosol | 28.02 | 41.14 |
| TraesCS6B01G185200.2 | Wheat | cytosol, mitochondrion, plastid | 35.99 | 40.62 |
| TraesCS1B01G176300.1 | Wheat | cytosol | 33.71 | 37.95 |
| TraesCS5B01G003100.1 | Wheat | cytosol | 32.12 | 33.65 |
| VIT_12s0059g01780.t01 | Wine grape | extracellular, mitochondrion, nucleus | 3.19 | 0.74 |
Protein Annotations
| Gene3D:3.40.47.10 | MapMan:50.2.3 | InterPro:Chalcone/stilbene_synth_C | InterPro:Chalcone/stilbene_synthase_N | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016740 | GO:GO:0016747 | InterPro:IPR016039 |
| PFAM:PF00195 | PFAM:PF02797 | PIRSF:PIRSF000451 | PANTHER:PTHR11877 | PANTHER:PTHR11877:SF24 | InterPro:Polyketide_synthase_type-III |
| SUPFAM:SSF53901 | InterPro:Thiolase-like | EnsemblPlantsGene:TraesCS7B01G371700 | EnsemblPlants:TraesCS7B01G371700.1 | TIGR:cd00831 | SEG:seg |
Description
No Description!
Coordinates
chr7B:-:637690261..637691751
Molecular Weight (calculated)
48163.2 Da
IEP (calculated)
7.125
GRAVY (calculated)
-0.049
Length
439 amino acids
Sequence
(BLAST)
(BLAST)
001: MIWKCYAPCS PVHIKHQAFA SRKANKSSLL PIPRLSCRWL AKKACESMAS STVCEIRRLQ RADGPALVLA IGTANPPNHL SQEEYLEYYF RATKSEHLTD
101: LKREFKSICD RTGTEKRFFH HTQELLDAHP RFFDGGHDRL EIAAAVAPDL AASAAAKAIT KWGRPATDIT HLIVSTNSCA RAPGADLHIA SLLGLRPSVV
201: CTLLQINGCS AGSASLRLAK DIAENNRGAR VLVVCVELSV AALRGPEENY PHTLISQAIF SDGAGAVIIG ADTVHPLERP LFEMVSASQI VIPGTDHLAM
301: IKTGEGGIYH QLSMRELVPI VAQNIEQCIS DELKQLGVGV EWNDLFWAMH PGVNALLDHV DQALMLDPGK LAASRTVLRE YGNMLSATVI FVLDEQRRRM
401: EEDGEEGVWG VMLGFGHGFT IETMVMHATS NLKQKYARM
101: LKREFKSICD RTGTEKRFFH HTQELLDAHP RFFDGGHDRL EIAAAVAPDL AASAAAKAIT KWGRPATDIT HLIVSTNSCA RAPGADLHIA SLLGLRPSVV
201: CTLLQINGCS AGSASLRLAK DIAENNRGAR VLVVCVELSV AALRGPEENY PHTLISQAIF SDGAGAVIIG ADTVHPLERP LFEMVSASQI VIPGTDHLAM
301: IKTGEGGIYH QLSMRELVPI VAQNIEQCIS DELKQLGVGV EWNDLFWAMH PGVNALLDHV DQALMLDPGK LAASRTVLRE YGNMLSATVI FVLDEQRRRM
401: EEDGEEGVWG VMLGFGHGFT IETMVMHATS NLKQKYARM
001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS
Arabidopsis Description
PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.