Factsheet for TraesCS2B01G006300.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G006700.1	Wheat	cytosol	84.42	98.98
TraesCS2B01G006800.1	Wheat	cytosol	79.65	98.92
TraesCS2D01G016100.1	Wheat	cytosol	82.68	96.95
HORVU2Hr1G002640.1	Barley	cytosol	80.09	93.91
TraesCS2B01G006000.1	Wheat	cytosol	77.71	91.12
TraesCS2A01G014800.1	Wheat	cytosol	66.02	77.41
TraesCS2B01G019200.1	Wheat	cytosol	55.63	64.74
TraesCS2B01G072600.1	Wheat	mitochondrion	54.33	62.59
TraesCS2B01G007000.1	Wheat	cytosol	53.25	61.5
TraesCS6B01G327900.1	Wheat	cytosol	40.69	56.29
TraesCS7B01G371700.1	Wheat	plastid	51.73	54.44
TraesCS5B01G487700.1	Wheat	cytosol	46.1	53.79
TraesCS5B01G383300.1	Wheat	cytosol, mitochondrion	45.24	53.73
TraesCS4B01G357800.1	Wheat	cytosol	34.42	53.36
TraesCS2B01G041300.1	Wheat	cytosol	44.37	53.11
TraesCS4B01G021600.1	Wheat	cytosol	45.24	52.12
TraesCS4B01G357600.1	Wheat	mitochondrion	27.06	51.65
TraesCS4B01G357700.1	Wheat	mitochondrion	26.41	51.48
TraesCS6B01G022300.1	Wheat	cytosol	43.29	49.75
TraesCS6B01G022500.1	Wheat	cytosol	43.94	49.39
TraesCS6B01G245200.1	Wheat	mitochondrion	35.5	48.81
TraesCS4B01G357100.1	Wheat	mitochondrion	34.63	48.63
TraesCS2B01G038600.1	Wheat	cytosol	36.15	46.13
TraesCS2B01G048400.1	Wheat	cytosol	38.53	45.18
TraesCS2B01G038700.1	Wheat	cytosol	38.53	45.18
TraesCS2B01G613100.1	Wheat	cytosol	38.96	45.11
TraesCS2B01G558400.1	Wheat	cytosol	38.74	44.97
TraesCS1B01G041000.1	Wheat	cytosol	37.66	44.05
TraesCS1B01G040500.1	Wheat	cytosol	37.88	43.86
TraesCS7B01G462200.1	Wheat	cytosol	28.36	43.81
TraesCS1B01G040000.1	Wheat	cytosol, mitochondrion	37.45	43.8
TraesCS1B01G040300.1	Wheat	cytosol, mitochondrion	37.23	43.54
TraesCS1B01G040100.1	Wheat	cytosol	37.01	43.29
TraesCS1B01G040200.1	Wheat	cytosol, mitochondrion	37.45	43.03
TraesCS6B01G185200.2	Wheat	cytosol, mitochondrion, plastid	32.68	38.82
TraesCS1B01G176300.1	Wheat	cytosol	30.3	35.9
TraesCS5B01G003100.1	Wheat	cytosol	30.09	33.17
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.03	0.74

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016747	InterPro:IPR016039
PFAM:PF00195	PFAM:PF02797	PANTHER:PTHR11877	PANTHER:PTHR11877:SF24	InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901
SignalP:SignalP-noTM	InterPro:Thiolase-like	EnsemblPlantsGene:TraesCS2B01G006300	EnsemblPlants:TraesCS2B01G006300.1	TIGR:cd00831	SEG:seg

Description

No Description!

Coordinates

chr2B:+:4013566..4015769

Molecular Weight (calculated)

50055.3 Da

IEP (calculated)

5.821

GRAVY (calculated)

0.030

Length

462 amino acids

Sequence
(BLAST)

001: MLISIPNRPP ALLLLPLNIW HLLRSLPSHN TVHNCCLLLS LSHTQVEALI YLCIKTYQVD DQGYCTETMA GSSPKVSEIR CGQRAEGSAA MLAIGTANPA
101: NKVSQEEYPD YYFRVTKSEH LTDHKDTFKI ICGLTGTENR FFYHTDELLN SHPVLLDNTS PSREARHDIV AKAAPELAAA AAKKAIAKWG RPASDITHLI
201: VSTNSDAGAP SADVRLVSLL GLRADVCRTM LHLNGCFAGC SALRLAKDLA ENNCGARVLV ACVELAISGF CSPGEGDCLD TLITHALFGD GAGAVIVGAD
301: PMHPIENPLF EMVSVSQTLV PSTENALTLN LGSNGTHGKV YTKLPTLVAD TMEPCLLEAF GPLEMDFQWN DLFWAVHPGS RGILDQLDKT LQLEPTKLAA
401: SRTVVQKFGN MFSATVIFVL DELQRRMEEE GEQAEWGAMV GFGPGFTIET MVLHATGALK KK

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.