Factsheet for TraesCS5B01G487700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G245200.1	Wheat	mitochondrion	60.61	71.43
TraesCS4B01G021600.1	Wheat	cytosol	71.46	70.57
Zm00001d040497_P001	Maize	mitochondrion	65.91	65.91
Zm00001d040479_P001	Maize	mitochondrion	65.15	64.82
Zm00001d040483_P001	Maize	cytosol	47.98	63.97
Os11t0529125-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	11.87	61.84
Zm00001d007717_P001	Maize	mitochondrion, plastid	51.77	58.91
TraesCS6B01G327900.1	Wheat	cytosol	48.48	57.48
EES15556	Sorghum	cytosol, mitochondrion	55.05	57.22
TraesCS5B01G383300.1	Wheat	cytosol, mitochondrion	55.81	56.81
TraesCS2B01G072600.1	Wheat	mitochondrion	57.32	56.61
OQU86627	Sorghum	mitochondrion	52.27	55.65
TraesCS2B01G019200.1	Wheat	cytosol	55.05	54.91
TraesCS2B01G006800.1	Wheat	cytosol	51.26	54.57
TraesCS2B01G007000.1	Wheat	cytosol	54.8	54.25
TraesCS2B01G041300.1	Wheat	cytosol	52.27	53.63
TraesCS2B01G006700.1	Wheat	cytosol	52.78	53.05
TraesCS2B01G006000.1	Wheat	cytosol	51.52	51.78
TraesCS4B01G357800.1	Wheat	cytosol	38.89	51.68
TraesCS4B01G357100.1	Wheat	mitochondrion	42.68	51.37
TraesCS2B01G038700.1	Wheat	cytosol	49.75	50.0
TraesCS2B01G613100.1	Wheat	cytosol	50.25	49.87
TraesCS6B01G022300.1	Wheat	cytosol	50.51	49.75
TraesCS2B01G048400.1	Wheat	cytosol	49.24	49.49
TraesCS2B01G038600.1	Wheat	cytosol	44.95	49.17
TraesCS6B01G022500.1	Wheat	cytosol	51.01	49.15
TraesCS2B01G558400.1	Wheat	cytosol	49.24	48.99
TraesCS7B01G371700.1	Wheat	plastid	54.29	48.97
TraesCS1B01G040000.1	Wheat	cytosol, mitochondrion	48.23	48.35
TraesCS4B01G357700.1	Wheat	mitochondrion	28.79	48.1
TraesCS1B01G041000.1	Wheat	cytosol	47.98	48.1
TraesCS1B01G040300.1	Wheat	cytosol, mitochondrion	47.98	48.1
TraesCS1B01G040100.1	Wheat	cytosol	47.98	48.1
TraesCS4B01G357600.1	Wheat	mitochondrion	29.29	47.93
TraesCS1B01G040500.1	Wheat	cytosol	48.23	47.87
TraesCS1B01G040200.1	Wheat	cytosol, mitochondrion	48.23	47.51
TraesCS7B01G462200.1	Wheat	cytosol	35.61	47.16
TraesCS2B01G006300.1	Wheat	extracellular, golgi	53.79	46.1
TraesCS6B01G185200.2	Wheat	cytosol, mitochondrion, plastid	39.65	40.36
TraesCS1B01G176300.1	Wheat	cytosol	37.63	38.21
TraesCS5B01G003100.1	Wheat	cytosol	37.37	35.32
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.28	0.69

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016747	InterPro:IPR016039
PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF29	InterPro:Polyketide_synthase_type-III
SUPFAM:SSF53901	InterPro:Thiolase-like	EnsemblPlantsGene:TraesCS5B01G487700	EnsemblPlants:TraesCS5B01G487700.1	TIGR:cd00831	SEG:seg

Description

No Description!

Coordinates

chr5B:+:658559273..658560555

Molecular Weight (calculated)

42615.6 Da

IEP (calculated)

6.450

GRAVY (calculated)

0.100

Length

396 amino acids

Sequence
(BLAST)

001: MPMSSQETKM ALLGNLTTGI RQVRQAQRAD GPACVLAIGT ANPANCVQQE EYADYYFRVT NSEHLTELKA KLNRICTKSA IKKRYFHHTE ELLQGHPEFL
101: DRTLPSLKAR LDITATAVPE LAAAAAAAAI AEWGRPAADI THLVVGTYAS AHMPGADHRL ASLLGLDPSV RTTMLYVNGC ASACAALRVA KDIAENNRRA
201: RVLVACAELT LIMFRAPQEG HLDTIISQAL LSDGAGAMII GADLEGSEGS LFEMVAASQT VVPATAHAAV GQFGEEGFLF HPCIEMPAIV RQNVERCLVD
301: ALGPLGLSGR WNDLFWAVHP GGRAILDGVE EVLQLEPKKL AASRHVLSEY GNMSGVSVIF VLDEIRRRHD EHRGLGVMLG IGPGLCLETM VLHACM

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.