Factsheet for TraesCS6B01G022300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G015300.1	Wheat	cytosol	90.8	90.57
TraesCS6B01G022500.1	Wheat	cytosol	86.57	84.67
TraesCS4B01G357800.1	Wheat	cytosol	61.94	83.56
TraesCS4B01G357600.1	Wheat	mitochondrion	49.5	82.23
TraesCS4B01G357700.1	Wheat	mitochondrion	48.26	81.86
TraesCS4B01G357100.1	Wheat	mitochondrion	64.93	79.33
TraesCS2B01G041300.1	Wheat	cytosol	73.13	76.17
EES15184	Sorghum	cytosol	67.16	65.85
Os10t0177300-00	Rice	cytosol, mitochondrion, peroxisome	50.75	64.35
Os10t0158400-00	Rice	cytosol	62.69	63.32
Os05t0212900-00	Rice	cytosol	60.95	62.5
Os10t0168500-00	Rice	cytosol, peroxisome, plastid	41.04	62.26
Os10t0167900-00	Rice	cytosol	61.19	61.65
TraesCS5B01G383300.1	Wheat	cytosol, mitochondrion	56.97	58.87
Os05t0213100-00	Rice	cytosol, peroxisome, plastid	61.69	58.08
Os10t0162856-00	Rice	cytosol	62.44	57.97
Os05t0212600-00	Rice	cytosol	43.28	57.62
Zm00001d016014_P001	Maize	cytosol, endoplasmic reticulum, mitochondrion	55.72	56.42
TraesCS6B01G327900.1	Wheat	cytosol	44.03	52.99
TraesCS2B01G072600.1	Wheat	mitochondrion	51.99	52.12
TraesCS4B01G021600.1	Wheat	cytosol	51.49	51.62
TraesCS2B01G006800.1	Wheat	cytosol	47.76	51.61
TraesCS2B01G006000.1	Wheat	cytosol	49.75	50.76
TraesCS2B01G007000.1	Wheat	cytosol	50.5	50.75
TraesCS5B01G487700.1	Wheat	cytosol	49.75	50.51
TraesCS2B01G006700.1	Wheat	cytosol	49.25	50.25
TraesCS2B01G019200.1	Wheat	cytosol	49.5	50.13
TraesCS6B01G245200.1	Wheat	mitochondrion	41.04	49.11
TraesCS2B01G048400.1	Wheat	cytosol	45.02	45.94
TraesCS1B01G040000.1	Wheat	cytosol, mitochondrion	45.02	45.82
TraesCS1B01G040100.1	Wheat	cytosol	45.02	45.82
TraesCS1B01G040300.1	Wheat	cytosol, mitochondrion	45.02	45.82
TraesCS2B01G038700.1	Wheat	cytosol	44.78	45.69
TraesCS1B01G040500.1	Wheat	cytosol	45.27	45.61
TraesCS2B01G558400.1	Wheat	cytosol	45.02	45.48
TraesCS2B01G038600.1	Wheat	cytosol	40.8	45.3
TraesCS1B01G041000.1	Wheat	cytosol	44.28	45.06
TraesCS1B01G040200.1	Wheat	cytosol, mitochondrion	45.02	45.02
TraesCS2B01G613100.1	Wheat	cytosol	44.28	44.61
TraesCS2B01G006300.1	Wheat	extracellular, golgi	49.75	43.29
TraesCS7B01G462200.1	Wheat	cytosol	31.34	42.14
TraesCS7B01G371700.1	Wheat	plastid	45.27	41.46
TraesCS6B01G185200.2	Wheat	cytosol, mitochondrion, plastid	39.8	41.13
TraesCS1B01G176300.1	Wheat	cytosol	37.06	38.21
TraesCS5B01G003100.1	Wheat	cytosol	37.56	36.04
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	2.99	0.64

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016747	InterPro:IPR016039
PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF23	InterPro:Polyketide_synthase_type-III
SUPFAM:SSF53901	InterPro:Thiolase-like	EnsemblPlantsGene:TraesCS6B01G022300	EnsemblPlants:TraesCS6B01G022300.1	TIGR:cd00831	SEG:seg

Description

No Description!

Coordinates

chr6B:-:13974233..13975732

Molecular Weight (calculated)

42604.3 Da

IEP (calculated)

6.605

GRAVY (calculated)

0.005

Length

402 amino acids

Sequence
(BLAST)

001: MGSCGTNSNG HGTAEVPRPH AQGPAAMLGI GTANPTGVLM PQDVFPDTLF RVTNSDHLTD LKQKLTRICG NAGIDKRHFH LTEEALAAHP ELFDPELLSL
101: DTRVDMTVDA VPKLAQCAAA KAIAEWGRPA TEITHLVFTT YSACGAPSAD LRLATLLGLR PTVSRTMLSL HGCYGGGRAL GLAKELAENN RGARVLVACS
201: ETTLVCFGAP DGGNLVGHAI FGDGAGAVIV GAGPFLDGEQ RPIFEMVHAT QTTVPKTEHA LGMQVSGGGI DFHLSIQVPT LIGHNVQGCL IHAFCGGDDD
301: DNGGAHLPSP LSGNGKWNDL FWAVHPGGRL ILDNIDKVLK LEPEKLAASR RVLREYGNMS GATIVFVLDE LRRRRSLLPE WGAMLAFGPG VTIETMVLRC
401: PR

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.