Factsheet for TraesCS6A01G015300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G022300.1	Wheat	cytosol	90.57	90.8
TraesCS6A01G015500.1	Wheat	cytosol, plastid	84.62	83.58
TraesCS5A01G526900.1	Wheat	cytosol, mitochondrion	81.14	81.95
EES15184	Sorghum	cytosol	68.73	67.56
Os10t0177300-00	Rice	cytosol, mitochondrion, peroxisome	51.36	65.3
Os05t0212900-00	Rice	cytosol	63.28	65.05
Os10t0158400-00	Rice	cytosol	64.02	64.82
Os10t0167900-00	Rice	cytosol	62.78	63.41
Os10t0168500-00	Rice	cytosol, peroxisome, plastid	41.44	63.02
TraesCS5A01G379400.1	Wheat	mitochondrion	58.56	61.62
TraesCS5A01G379500.1	Wheat	cytosol, mitochondrion	59.06	61.18
TraesCS5A01G379600.1	Wheat	cytosol	52.11	60.87
Os05t0212600-00	Rice	cytosol	45.41	60.6
Os05t0213100-00	Rice	cytosol, peroxisome, plastid	63.28	59.72
Os10t0162856-00	Rice	cytosol	63.52	59.12
Zm00001d016014_P001	Maize	cytosol, endoplasmic reticulum, mitochondrion	56.08	56.93
TraesCS6A01G298400.1	Wheat	cytosol	53.35	53.62
TraesCS2A01G021700.1	Wheat	cytosol	51.86	52.25
TraesCS6A01G215600.1	Wheat	mitochondrion	51.12	51.76
TraesCS4A01G438100.1	Wheat	cytosol	50.62	51.65
TraesCS4A01G438200.1	Wheat	cytosol	50.62	51.65
TraesCS4A01G436200.1	Wheat	cytosol, plastid	50.62	51.65
TraesCS4A01G436400.1	Wheat	cytosol, plastid	50.37	51.39
TraesCS7A01G093900.1	Wheat	mitochondrion	48.88	50.0
TraesCS4A01G392800.1	Wheat	cytosol, mitochondrion	42.43	49.85
TraesCS4A01G292500.1	Wheat	cytosol	48.39	48.99
TraesCS4A01G437600.1	Wheat	cytosol	48.14	48.74
TraesCS2A01G014800.1	Wheat	cytosol	46.9	47.97
TraesCS2A01G035300.1	Wheat	cytosol	45.66	46.7
TraesCS2A01G025700.1	Wheat	cytosol, golgi	45.16	46.19
TraesCS2A01G025600.1	Wheat	cytosol	45.16	46.19
TraesCS4A01G437900.1	Wheat	unclear	49.88	46.0
TraesCS2A01G527700.2	Wheat	cytosol	45.16	45.73
TraesCS2A01G025500.1	Wheat	cytosol	44.66	45.69
TraesCS1A01G032100.1	Wheat	cytosol	44.42	45.32
TraesCS1A01G032300.1	Wheat	cytosol	44.17	44.72
TraesCS1A01G160300.1	Wheat	cytosol	37.47	38.72
TraesCS5A01G002900.1	Wheat	cytosol	39.21	37.44
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	2.73	0.58

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016747	InterPro:IPR016039
PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF23	InterPro:Polyketide_synthase_type-III
SUPFAM:SSF53901	InterPro:Thiolase-like	EnsemblPlantsGene:TraesCS6A01G015300	EnsemblPlants:TraesCS6A01G015300.1	TIGR:cd00831	SEG:seg

Description

No Description!

Coordinates

chr6A:-:7397209..7398536

Molecular Weight (calculated)

43006.8 Da

IEP (calculated)

6.553

GRAVY (calculated)

-0.036

Length

403 amino acids

Sequence
(BLAST)

001: MGSCGSNGHG TAVVVVPRPH AEGPAAMLGI GTANPTGVLM PQDVFADTLF RITNSDHLTE LKHKLTRICG NTGIDKRHFH LTEETLAAHP ELLDPELPSL
101: GTRVDMTVDA VPKLAQRAAA KAIAEWGRPP ADITHLVFTT YSACGAPSAD LRLATLLGLR PTVSRTILSL HGCYGGGRAL GLAKELAENN RGARVLVACS
201: ETTLVCFGAP DGGNLVGHAI FGDGAGAVIV GAGPFLDGEQ RPIFEMVHAM QTTVPKTEHA LGMQVTGGGI DFHLSIQVPT LIGQNVERCL LNAFRGGHDD
301: DDDDAHLPSP LSGNGNKWND FFWAVHPGGR QILDNIDKVL KLEPEKLAAS RHVLREYGNM SGATIVFVLD ELRQRRSLLP EWGSMMAFGP GITIETMVLR
401: CPR

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.