Factsheet for TraesCS4A01G437600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G047000.1	Wheat	cytosol, plastid	91.46	91.46
TraesCS4A01G438100.1	Wheat	cytosol	76.13	76.71
TraesCS4A01G438200.1	Wheat	cytosol	75.88	76.46
TraesCS4A01G436400.1	Wheat	cytosol, plastid	74.87	75.44
TraesCS4A01G436200.1	Wheat	cytosol, plastid	74.87	75.44
TraesCS4A01G437900.1	Wheat	unclear	76.38	69.57
TraesCS2A01G021700.1	Wheat	cytosol	62.56	62.25
EER95816	Sorghum	cytosol	64.57	59.77
TraesCS6A01G298400.1	Wheat	cytosol	60.05	59.6
TraesCS7A01G093900.1	Wheat	mitochondrion	58.54	59.14
TraesCS2A01G014800.1	Wheat	cytosol	57.04	57.61
TraesCS4A01G392800.1	Wheat	cytosol, mitochondrion	49.5	57.43
TraesCS6A01G215600.1	Wheat	mitochondrion	57.04	57.04
TraesCS5A01G379400.1	Wheat	mitochondrion	53.77	55.87
TraesCS5A01G379500.1	Wheat	cytosol, mitochondrion	54.52	55.78
TraesCS4A01G292500.1	Wheat	cytosol	53.52	53.52
TraesCS5A01G379600.1	Wheat	cytosol	45.98	53.04
TraesCS5A01G526900.1	Wheat	cytosol, mitochondrion	49.25	49.12
TraesCS6A01G015300.1	Wheat	cytosol	48.74	48.14
TraesCS2A01G035300.1	Wheat	cytosol	47.24	47.72
TraesCS2A01G025500.1	Wheat	cytosol	46.98	47.46
TraesCS2A01G025600.1	Wheat	cytosol	46.73	47.21
TraesCS2A01G025700.1	Wheat	cytosol, golgi	46.73	47.21
TraesCS6A01G015500.1	Wheat	cytosol, plastid	48.24	47.06
TraesCS2A01G527700.2	Wheat	cytosol	46.48	46.48
TraesCS1A01G032100.1	Wheat	cytosol	44.72	45.06
TraesCS1A01G032300.1	Wheat	cytosol	44.72	44.72
TraesCS1A01G160300.1	Wheat	cytosol	36.18	36.92
TraesCS5A01G002900.1	Wheat	cytosol	34.67	32.7
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.77	0.79

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016747	InterPro:IPR016039
PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF34	InterPro:Polyketide_synthase_type-III
SUPFAM:SSF53901	InterPro:Thiolase-like	EnsemblPlantsGene:TraesCS4A01G437600	EnsemblPlants:TraesCS4A01G437600.1	TIGR:cd00831	SEG:seg

Description

No Description!

Coordinates

chr4A:-:707304305..707305501

Molecular Weight (calculated)

42048.5 Da

IEP (calculated)

5.961

GRAVY (calculated)

0.155

Length

398 amino acids

Sequence
(BLAST)

001: MASSNSIPAS TLGEIRAAQR ADGLAAVLAI GTANPPHCVP QGDYPDYYFR VTQSDHLTHL KPTFAKLCRI PGVERRFFYH TEELLSAQPD MSLEARLEIV
101: AAAAPELAAS AAAKAIAEWG RTAADITHLV VTTNAGAHAP GTDVRLVSLL GLRHDVCRTA LQLNGCAAGS AALRLAKDFA ENNRGARVLV VCVELTVAVF
201: RGPVESDTFD TLISQALFGD GAGAAIVAAD PDARERPLFN MVAASQAVIP DTEHVPRMHL GSGGIDWNIS NGLPRLAAGI IERCLLDALG DQLTTVVGGV
301: VDWNDLFWAV HPGSGGMLER IGKALRLAPE KLAASRTVVR EYGNMLGATV IFVLDEVRRR RINPEGAGAG AGLNEEWGVM IGFGPGFTVE AMLLHAAT

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.