Factsheet for TraesCS7A01G093900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G392800.1	Wheat	cytosol, mitochondrion	71.83	82.51
HORVU7Hr1G020920.2	Barley	cytosol, peroxisome	90.1	76.51
TraesCS2A01G021700.1	Wheat	cytosol	63.71	62.75
TraesCS2A01G014800.1	Wheat	cytosol	62.18	62.18
TraesCS4A01G438100.1	Wheat	cytosol	60.15	60.0
TraesCS4A01G438200.1	Wheat	cytosol	59.9	59.75
TraesCS4A01G436200.1	Wheat	cytosol, plastid	59.9	59.75
TraesCS4A01G436400.1	Wheat	cytosol, plastid	59.64	59.49
TraesCS4A01G437600.1	Wheat	cytosol	59.14	58.54
TraesCS5A01G379500.1	Wheat	cytosol, mitochondrion	56.35	57.07
TraesCS5A01G379400.1	Wheat	mitochondrion	55.08	56.66
TraesCS6A01G298400.1	Wheat	cytosol	56.85	55.86
TraesCS5A01G379600.1	Wheat	cytosol	47.72	54.49
TraesCS6A01G215600.1	Wheat	mitochondrion	54.57	54.02
TraesCS4A01G437900.1	Wheat	unclear	59.64	53.78
TraesCS4A01G292500.1	Wheat	cytosol	52.03	51.51
TraesCS6A01G015300.1	Wheat	cytosol	50.0	48.88
TraesCS5A01G526900.1	Wheat	cytosol, mitochondrion	49.24	48.62
TraesCS6A01G015500.1	Wheat	cytosol, plastid	50.25	48.53
TraesCS2A01G035300.1	Wheat	cytosol	45.43	45.43
TraesCS2A01G025600.1	Wheat	cytosol	45.43	45.43
TraesCS2A01G025700.1	Wheat	cytosol, golgi	45.18	45.18
TraesCS2A01G025500.1	Wheat	cytosol	45.18	45.18
TraesCS2A01G527700.2	Wheat	cytosol	45.18	44.72
TraesCS1A01G032100.1	Wheat	cytosol	43.91	43.8
TraesCS1A01G032300.1	Wheat	cytosol	43.65	43.22
TraesCS1A01G160300.1	Wheat	cytosol	36.29	36.67
TraesCS5A01G002900.1	Wheat	cytosol	37.31	34.83
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.3	0.69

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016747	InterPro:IPR016039
PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF34	InterPro:Polyketide_synthase_type-III
SUPFAM:SSF53901	InterPro:Thiolase-like	EnsemblPlantsGene:TraesCS7A01G093900	EnsemblPlants:TraesCS7A01G093900.1	TIGR:cd00831	SEG:seg

Description

No Description!

Coordinates

chr7A:+:57545071..57546379

Molecular Weight (calculated)

42924.9 Da

IEP (calculated)

5.470

GRAVY (calculated)

0.039

Length

394 amino acids

Sequence
(BLAST)

001: MANAREIRRL QRADGPAAVL AIGTANPQHR LSQDEYPEYY FRVTNSEHLA EQQKPILNMI CRLTGNEWRF VHNTDKMMSA HPEFIDRATP SLEQRLAIVA
101: VVAPELLAAA ATKAIASWGR PATDITHLVV VTNSGAGSPS ADVPLATLLG LRHNVCRTVL QLNGCFAGCA ALRLAKDLAE NNRGARVLVA CVELMSVAGF
201: RGPTEGEDWV NNLIRNTVFG DGAGAVIVGA DAVEPVERPL FEMVSASQTV VPDTLQVVTA ELKTCGLDGN VSTKLPNLVA DNIKQCLLDV FSPLGIEVKW
301: NDLFWAVHPG AMAILDKIER VLLLEPGKLM ASRTVAREYG NMLSATIIFV LDEQRRRMEE EGEWAEWGAM VGFGPGFTME TMVLQATSNL KKIN

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.