Factsheet for TraesCS4A01G292500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 2
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, vacuole
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G021600.1	Wheat	cytosol	90.95	90.27
HORVU4Hr1G003250.1	Barley	cytosol	90.95	86.4
TraesCS6A01G215600.1	Wheat	mitochondrion	77.64	77.64
Zm00001d040483_P001	Maize	cytosol	50.25	67.34
Zm00001d040479_P001	Maize	mitochondrion	65.58	65.58
Zm00001d040497_P001	Maize	mitochondrion	64.32	64.65
Os11t0529125-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	11.81	61.84
Zm00001d007717_P001	Maize	mitochondrion, plastid	51.26	58.62
EES15556	Sorghum	cytosol, mitochondrion	56.03	58.53
TraesCS5A01G379500.1	Wheat	cytosol, mitochondrion	55.78	57.07
TraesCS6A01G298400.1	Wheat	cytosol	57.29	56.86
TraesCS5A01G379400.1	Wheat	mitochondrion	54.27	56.4
OQU86627	Sorghum	mitochondrion	52.51	56.18
TraesCS2A01G021700.1	Wheat	cytosol	56.03	55.75
TraesCS4A01G436200.1	Wheat	cytosol, plastid	55.03	55.44
TraesCS4A01G438100.1	Wheat	cytosol	55.03	55.44
TraesCS4A01G436400.1	Wheat	cytosol, plastid	54.77	55.19
TraesCS4A01G438200.1	Wheat	cytosol	54.77	55.19
TraesCS4A01G437600.1	Wheat	cytosol	53.52	53.52
TraesCS5A01G379600.1	Wheat	cytosol	45.98	53.04
TraesCS4A01G392800.1	Wheat	cytosol, mitochondrion	45.23	52.48
TraesCS7A01G093900.1	Wheat	mitochondrion	51.51	52.03
TraesCS2A01G035300.1	Wheat	cytosol	51.26	51.78
TraesCS2A01G025600.1	Wheat	cytosol	50.75	51.27
TraesCS2A01G025500.1	Wheat	cytosol	50.75	51.27
TraesCS2A01G014800.1	Wheat	cytosol	50.5	51.02
TraesCS2A01G025700.1	Wheat	cytosol, golgi	50.5	51.02
TraesCS2A01G527700.2	Wheat	cytosol	50.75	50.75
TraesCS4A01G437900.1	Wheat	unclear	55.28	50.34
TraesCS5A01G526900.1	Wheat	cytosol, mitochondrion	50.25	50.13
TraesCS1A01G032100.1	Wheat	cytosol	49.5	49.87
TraesCS1A01G032300.1	Wheat	cytosol	49.25	49.25
TraesCS6A01G015300.1	Wheat	cytosol	48.99	48.39
TraesCS6A01G015500.1	Wheat	cytosol, plastid	48.49	47.3
TraesCS1A01G160300.1	Wheat	cytosol	35.43	36.15
TraesCS5A01G002900.1	Wheat	cytosol	36.68	34.6
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.27	0.69

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016747	InterPro:IPR016039
PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF34	InterPro:Polyketide_synthase_type-III
SUPFAM:SSF53901	InterPro:Thiolase-like	EnsemblPlantsGene:TraesCS4A01G292500	EnsemblPlants:TraesCS4A01G292500.1	TIGR:cd00831	SEG:seg

Description

No Description!

Coordinates

chr4A:+:595255785..595257327

Molecular Weight (calculated)

42450.5 Da

IEP (calculated)

6.600

GRAVY (calculated)

0.139

Length

398 amino acids

Sequence
(BLAST)

001: MVLLGNLTAS PAAAVIRQAQ RADGPASVLA IGTANPANCV LQQEYADYYF RVINAEHDTK LKSKLHRICK SSAIKKRYFY HTDEMLRDHP ELIDRTLPSL
101: DTRMGIATTA VPELAAAAAT KAMAEWGRPA TDVTHLIVGT YCGAHMPGAD VRLASLLGLA PSVRRTMLYL NGCNSGATAL RVAKDIAENN RGARVLVVCA
201: ELTLILLRAP EDEADKATLI MQALFGDGAA AVIVGADVNR GSVECPLFEM VAASQAVIPE SERAAAGRLG EDGLLFRPAV EMTTLIRENV EQCLVEALAP
301: LGLSGGWNRL FWAVHPGGRA ILDGVEAVLR LDSEKLAASR HVLSEYGNMS GPTVIFVLDE IRRRRGELGV GRDGLGVLLG LGPGISVETI VLHATGNY

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.