Factsheet for HORVU4Hr1G003250.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G021600.1	Wheat	cytosol	88.07	92.02
TraesCS4A01G292500.1	Wheat	cytosol	86.4	90.95
HORVU6Hr1G055000.1	Barley	cytosol, mitochondrion	74.7	79.04
Zm00001d040483_P001	Maize	cytosol	49.4	69.7
Zm00001d040479_P001	Maize	mitochondrion	64.92	68.34
Zm00001d040497_P001	Maize	mitochondrion	63.96	67.68
Os11t0529125-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	11.93	65.79
Zm00001d007717_P001	Maize	mitochondrion, plastid	51.07	61.49
HORVU7Hr1G009190.1	Barley	cytosol	54.65	59.33
EES15556	Sorghum	cytosol, mitochondrion	53.94	59.32
HORVU6Hr1G074060.2	Barley	cytosol	56.09	58.31
OQU86627	Sorghum	mitochondrion	50.6	56.99
HORVU7Hr1G024480.2	Barley	cytosol	53.46	56.85
HORVU2Hr1G003280.1	Barley	cytosol	53.46	56.42
HORVU2Hr1G005220.3	Barley	cytosol	50.6	53.67
HORVU2Hr1G002640.1	Barley	cytosol	49.4	52.54
HORVU2Hr1G116390.2	Barley	cytosol	49.64	52.26
HORVU1Hr1G089540.1	Barley	mitochondrion	48.21	50.63
HORVU6Hr1G003020.2	Barley	cytosol	49.88	50.61
HORVU5Hr1G093950.1	Barley	cytosol	48.45	50.37
HORVU1Hr1G004830.1	Barley	cytosol	47.49	50.13
HORVU3Hr1G006040.1	Barley	cytosol	46.54	48.99
HORVU2Hr1G004170.4	Barley	plastid	50.36	48.73
HORVU7Hr1G020920.2	Barley	cytosol, peroxisome	51.55	46.55
HORVU1Hr1G064330.1	Barley	cytosol	40.33	42.78
HORVU5Hr1G000690.2	Barley	cytosol, peroxisome	36.75	33.7
HORVU1Hr1G042510.2	Barley	cytosol	35.08	30.25
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	2.86	0.64

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	UniProt:A0A287MYD7	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016746
GO:GO:0016747	EnsemblPlantsGene:HORVU4Hr1G003250	EnsemblPlants:HORVU4Hr1G003250.1	InterPro:IPR016039	PFAM:PF00195	PFAM:PF02797
PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF34	InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901	InterPro:Thiolase-like
UniParc:UPI000B46C710	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:6494440..6496418

Molecular Weight (calculated)

44765.2 Da

IEP (calculated)

6.786

GRAVY (calculated)

0.089

Length

419 amino acids

Sequence
(BLAST)

001: YCPCWTAVLP AETKMVLLGN LTASPAATAI RQAQRADGPA SVLAIGTANP ANCVRQDEYA DFYFRVTNAE HLTKLKSKLH RICKNSAIKK RYFHHTEEML
101: RDHPELIDRA LPSLDTRMSI AATAIPELAA AAATKAIAEW GRPATDITHL VVSTYCGGHM PGADLRLASL LGLAPSVRRT MLYLNGCNSG ATALRVAKDV
201: AENNRGARVL VVCAELTLIL LRAPEDEADK ATLVMQALFG DGAGAVIVGA DDANRGAVVE RPLFEMVAAS QTVIPESEHA AAGRLGEDGL LFRPAVEMTT
301: LVRENVERCL VDALGPLGLS GGWNRLFWAV HPGGRAILDG VEAVLRLDPE KLAASRHVLS EYGNMSGPTV IFVLDEIRRR GGEHGVGRDG LGVLLGLGPG
401: ISVETIVLHA TGNLLERIY

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.