Factsheet for HORVU2Hr1G003280.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G007000.1	Wheat	cytosol	88.16	87.5
TraesCS2D01G022700.1	Wheat	cytosol, mitochondrion, plastid	87.91	87.25
TraesCS2A01G021700.1	Wheat	cytosol	87.66	87.0
TraesCS2D01G051300.1	Wheat	cytosol	87.66	86.78
TraesCS3D01G500500.1	Wheat	cytosol	87.41	86.53
TraesCSU01G000100.1	Wheat	cytosol, mitochondrion	80.1	78.91
TraesCSU01G143400.1	Wheat	cytosol, mitochondrion	79.6	78.41
HORVU7Hr1G024480.2	Barley	cytosol	67.51	68.02
HORVU7Hr1G009190.1	Barley	cytosol	63.98	65.8
Os07t0526400-01	Rice	cytosol	66.0	65.66
Os07t0525900-00	Rice	cytosol	64.74	64.57
Os07t0525500-00	Rice	plastid	58.94	59.85
HORVU2Hr1G002640.1	Barley	cytosol	59.19	59.64
HORVU6Hr1G055000.1	Barley	cytosol, mitochondrion	58.19	58.33
HORVU6Hr1G074060.2	Barley	cytosol	57.68	56.82
HORVU4Hr1G003250.1	Barley	cytosol	56.42	53.46
HORVU7Hr1G020920.2	Barley	cytosol, peroxisome	60.71	51.94
HORVU6Hr1G003020.2	Barley	cytosol	51.89	49.88
HORVU5Hr1G093950.1	Barley	cytosol	50.63	49.88
HORVU2Hr1G005220.3	Barley	cytosol	48.87	49.11
HORVU1Hr1G089540.1	Barley	mitochondrion	48.36	48.12
HORVU2Hr1G116390.2	Barley	cytosol	48.11	47.99
HORVU1Hr1G004830.1	Barley	cytosol	46.6	46.6
HORVU3Hr1G006040.1	Barley	cytosol	45.59	45.48
HORVU2Hr1G004170.4	Barley	plastid	48.61	44.57
HORVU1Hr1G064330.1	Barley	cytosol	41.06	41.27
HORVU5Hr1G000690.2	Barley	cytosol, peroxisome	38.04	33.04
HORVU1Hr1G042510.2	Barley	cytosol	37.53	30.66
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	4.28	0.9

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	UniProt:A0A287GX10	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016746
GO:GO:0016747	EnsemblPlantsGene:HORVU2Hr1G003280	EnsemblPlants:HORVU2Hr1G003280.1	InterPro:IPR016039	PFAM:PF00195	PFAM:PF02797
PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF24	InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901	InterPro:Thiolase-like
UniParc:UPI000B4653F2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:7158114..7159802

Molecular Weight (calculated)

43016.8 Da

IEP (calculated)

6.451

GRAVY (calculated)

-0.001

Length

397 amino acids

Sequence
(BLAST)

001: MGSNTLSSVR EIRHSQRANG PAAILAIGTA NPPNCVSQKE YPDYYFRVTK SQHLTDLKQK LSNFCEMTST EKRYFHHTEE LLDAHPEFLC RDTPSLDARL
101: DIAAAAAPEL AALAAAKAIA EWGCPATDIT HLVISTNSGA HAPGIDLRLV SLLGLRVSVC RTVLNLNGCS GGAASLRLAK DLAENNRGAR VLVACVELTV
201: VSFRGPEEAY PHKLISQAVF GDGAGAVIVG ADAVHSIERP LFEMVSASQN TIPATDGVLT MQLTEAGLDG HIFTRELIPL AAKHIEQCLT DAFEQLGIIC
301: GGTKWNDLFF VVHPGIRGIM DHIQRALRLD PGKLAASRTV LRDYGNMLGA TLIFVLDEQR RQMEETGEWG VMMGFGPGFT VETMLLHSVA RNLHDKN

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.