Factsheet for HORVU2Hr1G002640.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G016100.1	Wheat	cytosol	93.91	93.91
TraesCS2B01G006700.1	Wheat	cytosol	93.65	93.65
TraesCS2B01G006800.1	Wheat	cytosol	88.07	93.28
TraesCS2B01G006000.1	Wheat	cytosol	89.59	89.59
TraesCS2B01G006300.1	Wheat	extracellular, golgi	93.91	80.09
TraesCS2A01G014800.1	Wheat	cytosol	76.14	76.14
HORVU7Hr1G024480.2	Barley	cytosol	65.74	65.74
HORVU7Hr1G009190.1	Barley	cytosol	58.38	59.59
HORVU2Hr1G003280.1	Barley	cytosol	59.64	59.19
HORVU7Hr1G020920.2	Barley	cytosol, peroxisome	63.2	53.66
HORVU6Hr1G074060.2	Barley	cytosol	53.55	52.36
HORVU6Hr1G055000.1	Barley	cytosol, mitochondrion	51.52	51.26
HORVU4Hr1G003250.1	Barley	cytosol	52.54	49.4
HORVU6Hr1G003020.2	Barley	cytosol	50.25	47.94
HORVU2Hr1G005220.3	Barley	cytosol	44.92	44.81
HORVU5Hr1G093950.1	Barley	cytosol	45.18	44.17
HORVU2Hr1G116390.2	Barley	cytosol	44.42	43.97
HORVU1Hr1G004830.1	Barley	cytosol	43.65	43.32
HORVU1Hr1G089540.1	Barley	mitochondrion	43.65	43.11
HORVU3Hr1G006040.1	Barley	cytosol	41.37	40.95
HORVU2Hr1G004170.4	Barley	plastid	44.67	40.65
HORVU1Hr1G064330.1	Barley	cytosol	39.34	39.24
HORVU5Hr1G000690.2	Barley	cytosol, peroxisome	35.79	30.85
HORVU1Hr1G042510.2	Barley	cytosol	34.26	27.78
VIT_12s0059g01780.t01	Wine grape	extracellular, mitochondrion, nucleus	3.81	0.79

Protein Annotations

Gene3D:3.40.47.10	MapMan:50.2.3	ProteinID:AMQ48725.1	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016746
GO:GO:0016747	EnsemblPlantsGene:HORVU2Hr1G002640	EnsemblPlants:HORVU2Hr1G002640.1	InterPro:IPR016039	UniProt:M0XGE3	PFAM:PF00195
PFAM:PF02797	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF24	InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901
InterPro:Thiolase-like	UniParc:UPI0002961829	SEG:seg	:	:	:

Description

Eceriferum-c [Source:UniProtKB/TrEMBL;Acc:M0XGE3]

Coordinates

chrchr2H:-:5999399..6001783

Molecular Weight (calculated)

42614.2 Da

IEP (calculated)

5.982

GRAVY (calculated)

-0.019

Length

394 amino acids

Sequence
(BLAST)

001: MAGSSPKVSE IRCAQRAEGS AAMLAIGTAN PANKVSQEEY PDYYFRVTKS EHLTDHKDTF KIICGLTGTE NRFFYHTDEL LNSHPVLLNH TSPSREARHD
101: IVAKAAPELA AAAAKKAIEK WGRPATDITH IIVSTNSDAG APSADVRLVS LLGLRADVCR TMLHLNGCFA GCSALRLAKD LAENNRGARV LVACMELAIS
201: GFCSPGEGDC LDTLITHALF GDGAGAVIVG ADPMHAVENP LFEMVSVSQT LVPNTEHLLT LELGSHGTHG KVYTKLPTLV ADTMEPCLLK AFAPLEMDFQ
301: WNDLFWAVHP GSRGIMDQLD KTLQLEPTKL AASRTVVQNF GNMFSATVIF VLEELLRRME EEGERAEWGA MVGFGPGFTI ETMVLHAAGA LNKK

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.